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AT2G10340.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.817
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC007264EMBL:CP002685EnsemblPlants:AT2G10340EnsemblPlants:AT2G10340.1entrez:815493GeneID:815493Gramene:AT2G10340.1
KEGG:ath:AT2G10340PIR:G84490Proteomes:UP000006548RefSeq:NP_178836.1TAIR:AT2G10340UniGene:At.66182UniProt:Q9SHW3
Coordinates (TAIR10) chr2:-:3984031..3984288
Molecular Weight (calculated) 8756.41 Da
IEP (calculated) 4.09
GRAVY (calculated) 0.02
Length 85 amino acids
Sequence (TAIR10)
(BLAST)
1: MVQTIIDPVI LPFNGDDTKS SLLTGGDPPS AAELAAKTVE DQLPREANPT APAVAPLSLS LEDLKAILAT VTKDLSQRLT AGSTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)