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AT2G07200.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.994
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Cysteine proteinases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); Has 37 Blast hits to 37 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002685EnsemblPlants:AT2G07200EnsemblPlants:AT2G07200.1entrez:3768448
GeneID:3768448GO:GO:0008234Gramene:AT2G07200.1InterPro:IPR003653
KEGG:ath:AT2G07200OMA:RIMGPTEPaxDb:F4IK96Pfam:PF02902
ProteinModelPortal:F4IK96Proteomes:UP000006548RefSeq:NP_178733.2SUPFAM:SSF54001
TAIR:AT2G07200UniGene:At.74533UniProt:F4IK96
Coordinates (TAIR10) chr2:+:2989205..2989878
Molecular Weight (calculated) 17202.20 Da
IEP (calculated) 9.24
GRAVY (calculated) -0.09
Length 151 amino acids
Sequence (TAIR10)
(BLAST)
001: MDATMHLFRE KSSIGRLNLA RVGLLDCIFG VRLNVEYKKS GGIRNHRPTN SQGNSHKIKW KNLLLAPYTL VHVLVPPDLN KTCCDCGVYA LKYIECHFMG
101: LSLDMLDDVN IKDARLRIAV DLWKAAFDPV FIDRMTKYKP PKINSEIIDI A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)