AT2G07040.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
PRK2A; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, pollen tube growth; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G35390.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:2916621..2918760 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 72525.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.83 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 647 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESKCLMFVS IVSVFFMVVN GVSETETLLK FKNSLVIGRA NALESWNRRN PPCKWTGVLC DRGFVWGLRL ENLELSGSID IEALMGLNSL RSLSFINNKF 101: KGPFPEFKKL VALKSLYLSN NQFDLEIPKD AFDGMGWLKK LHLEQNNFIG EIPTSLVKSP KLIELRLDGN RFTGQIPEFR HHPNMLNLSN NALAGQIPNS 201: FSTMDPKLFE GNKGLCGKPL DTKCSSPYNH SSEPKSSTKK TSSKFLYIVA AAVAALAASL IIIGVVIFLI RRRKKKQPLL SAEPGPSSLQ MRAGIQESER 301: GQGSYHSQNR AAKKMIHTTK LSFLRDDKGK FELQDLLKAS AEILGSGCFG ASYKTLLSNG SVMVVKRFKH MNSAGIDEFQ EHMKRLGRLN HENLLPIVAY 401: YYKKEEKLFV SDFVANGSLA AHLHGHKSLG QPSLDWPTRF NIVKGVGRGL LYLHKNLPSL MAPHGHLKSS NVLLSEKFEP LLMDYGLIPM INEESAQELM 501: VAYKSPEYVK QSRVTKKTDV WGLGVLILEI LTGKLLESFS QVDKESEEDL ASWVRSSFKG EWTQELFDQE MGKTSNCEAH ILNLMRIGLS CCEVDVEKRL 601: DIREAVEKME DLMKEREQGD DDFYSTYASE ADGRSSRGLS SEGINLS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)