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AT2G05620.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25641898 (2015): plasma membrane
  • PMID:24872594 (2014): plastid plastid envelope
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:23667806 (2013): plastid plastid thylakoid
  • PMID:23549413 (2013): plastid
  • PMID:23390424 (2013): plastid plastid envelope
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:18431481 (2008): plastid plastid thylakoid
  • PMID:14729914 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : proton gradient regulation 5
Curator
Summary (TAIR10)
Involved in electron flow in Photosystem I. Essential for photoprotection.
Computational
Description (TAIR10)
proton gradient regulation 5 (PGR5); FUNCTIONS IN: electron carrier activity; INVOLVED IN: response to water deprivation, response to high light intensity, photosynthetic electron transport in photosystem I; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast thylakoid; EXPRESSED IN: 30 plant structures; EXPRESSED DURING: 15 growth stages; Has 90 Blast hits to 90 proteins in 40 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Protein Annotations
BioGrid:511eggNOG:ENOG410IZAQeggNOG:ENOG411252EEMBL:AC006220EMBL:AF375454EMBL:AY060546EMBL:AY085613
EMBL:CP002685EnsemblPlants:AT2G05620EnsemblPlants:AT2G05620.1entrez:815111GeneID:815111Genevisible:Q9SL05GO:GO:0009055
GO:GO:0009414GO:GO:0009507GO:GO:0009534GO:GO:0009535GO:GO:0009644GO:GO:0009773GO:GO:0010117
GO:GO:0071484Gramene:AT2G05620.1hmmpanther:PTHR35709hmmpanther:PTHR35709:SF1HOGENOM:HOG000242985InParanoid:Q9SL05IntAct:Q9SL05
KEGG:ath:AT2G05620OMA:GEDYQTMPaxDb:Q9SL05Pfam:Q9SL05PhylomeDB:Q9SL05PIR:G84470PRIDE:Q9SL05
PRO:PR:Q9SL05ProteinModelPortal:Q9SL05Proteomes:UP000006548RefSeq:NP_565327.1STRING:3702.AT2G05620.1TAIR:AT2G05620tair10-symbols:PGR5
UniGene:At.27446UniProt:Q9SL05
Coordinates (TAIR10) chr2:-:2081204..2081687
Molecular Weight (calculated) 14293.60 Da
IEP (calculated) 11.34
GRAVY (calculated) -0.08
Length 133 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAASISAIG CNQTLIGTSF YGGWGSSISG EDYQTMLSKT VAPPQQARVS RKAIRAVPMM KNVNEGKGLF APLVVVTRNL VGKKRFNQLR GKAIALHSQV
101: ITEFCKSIGA DAKQRQGLIR LAKKNGERLG FLA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)