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AT2G05250.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.681
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock N-terminal domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 13630 Blast hits to 13432 proteins in 2557 species: Archae - 75; Bacteria - 5761; Metazoa - 2469; Fungi - 964; Plants - 1524; Viruses - 9; Other Eukaryotes - 2828 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:ENOG410IVQEEMBL:AC007018EMBL:AK229446
EMBL:AY056805EMBL:BT001092EMBL:CP002685EnsemblPlants:AT2G05230.1
EnsemblPlants:AT2G05250EnsemblPlants:AT2G05250.1entrez:815071entrez:815073
Gene3D:1.10.287.110GeneID:815071GeneID:815073Gramene:AT2G05230.1
Gramene:AT2G05250.1hmmpanther:PTHR24078hmmpanther:PTHR24078:SF277HOGENOM:HOG000238623
IntAct:Q9S7L6InterPro:IPR001623InterPro:IPR018253InterPro:IPR024593
KEGG:ath:AT2G05230KEGG:ath:AT2G05250OMA:VSEAWTVPfam:PF00226
Pfam:PF11926Pfscan:PS50076PhylomeDB:Q9S7L6PIR:D84466
PRINTS:PR00625PROSITE:PS00636PROSITE:PS50076Proteomes:UP000006548
RefSeq:NP_565321.1RefSeq:NP_565322.1scanprosite:PS00636SMART:SM00271
SMR:Q9S7L6STRING:3702.AT2G05250.1SUPFAM:SSF46565TAIR:AT2G05230
TAIR:AT2G05250UniGene:At.14247UniGene:At.48424UniProt:Q9S7L6
Coordinates (TAIR10) chr2:-:1913645..1915765
Molecular Weight (calculated) 79027.10 Da
IEP (calculated) 8.93
GRAVY (calculated) -0.58
Length 706 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAYREEALR VKQIAERRFA EKDFTSARSY ALKAKSLFPD LEGLSQMVAT FEVYLASQTR SGGQIDYYAV LGLKPSAGKR EVKKQYKKMA VLLHPDKNKC
101: IGADGAFHLI SEAWSFLSNE FNKSTFYYKR KKHIDSTEVQ KHSTEYMPGT GTGTGTAVFD RFPPSSERLD TFWTVCTSCK VQYEYLRKYV NKRLSCKNCR
201: GAFIAVETGP APVSAPFHYT PPSHAPPSHA PPSHAPPSNG YGAHGYDAMS RMPTNSTYFL GHYPGQGHGY DYSTNGSYEW SSYSGTTTSP GNLDLKRVSS
301: VSNGYPYKHS NSVVSGGINK VKDGSNGTCS KKSTPGGLIY PNQISMSAHA SANKVGRPGK KSKVFMEAAA NGFVENPLRS VSVSKTANTD AKMDQDYKLH
401: IQSSTRRWSA ASVLDTRKPL IQKARTDIKQ RLEMMRLALE AAAAAEDATP LDEKTVLSCK LGDVTGRKTN GPITVPDSDF HDFDKNRSEE SFEPRQIWAI
501: YDEDDGMPRL YCVVREVLSV QPFKIDIAYL SSKTDIEFGS MKWVQYGFTK SCGHFRIRNS DIVDHVNIFS HLLKGKKTGR GGCVRIFPTA GEIWAVYKNW
601: SLNWDGSTPD EVRHQYEMVE ILDEYTEQYG VCVTPLVKLE GYKTVYHRST REDSKKWIPR CEMLRFSHQV PSWFLKDATS GFPENCWDLD PAAIPEELLH
701: IGAGTN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)