AT2G04650.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.944 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ADP-glucose pyrophosphorylase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT1G74910.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:1621986..1624486 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44940.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.60 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||||||
| Length | 406 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSEEKVVAVI MVGGPTKGTR FRPLSFNTPK PLIPLAGQPM IHHPISACKK ISNLAQIFLI GFYEEREFAL YVSSISNELK IPVRYLKEDK PHGSAGALYY 101: FRDRIMEEKP SHVFLLNCDV CCSFPLQGIL DAHRRYGGIG TMLVIKVSAE AASQFGELIA DPDTKELLHY TEKPETFVSD LINCGVYVFT SDIFNAIEEV 201: YSQIRDTSSN YQSATRSVPA DFVRLDQDIL SPLAGKKQLY TYENKDFWEQ IKTPGKSLKC SALYLSQFRE TSPHILASGD GTNRKPTIIG DVYIHPSVKL 301: HPTAKIGPNV SISANVRVGP GVRLISCIIL DDVEIKENAV VINSIIGWKS SIGRWSRVQA SGDYNDRLGI TILGEAVTVE DEVAVIGSIV LQNKTLNVSV 401: QDDIIL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)