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AT2G04300.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Predictors External Curations
AdaBoost: extracellularBaCelLo: endoplasmic reticulumBaCelLo: extracellularBaCelLo: golgi
EpiLoc: nucleusiPSORT: endoplasmic reticulumiPSORT: extracellulariPSORT: golgi
MultiLoc: plasma membraneNucleo: nucleusPlant-mPloc: cytosolPlant-mPloc: nucleus
Plant-mPloc: plasma membranePlant-mPloc: plastidPredotar: endoplasmic reticulumPredotar: extracellular
Predotar: golgiPredSL: endoplasmic reticulumPredSL: extracellularPredSL: golgi
PProwler: endoplasmic reticulumPProwler: extracellularPProwler: golgiSLPFA: endoplasmic reticulum
SLPFA: extracellularSLPFA: golgiSLP-Local: endoplasmic reticulumSLP-Local: extracellular
SLP-Local: golgiSubLoc: extracellularTargetP: endoplasmic reticulumTargetP: extracellular
TargetP: golgiWoLF PSORT: plasma membraneYLoc: plasma membrane
 no data
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)		 Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G21340.1); Has 164391 Blast hits to 122229 proteins in 4417 species: Archae - 101; Bacteria - 13737; Metazoa - 44157; Fungi - 9996; Plants - 77212; Viruses - 425; Other Eukaryotes - 18763 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT2G04300EnsemblPlants:AT2G04300.1entrez:814968hmmpanther:PTHR27003
hmmpanther:PTHR27003:SF44Pfam:PF07714Pfam:PF12819Pfam:PF13855
Pfscan:PS50011scanprosite:PS00107scanprosite:PS00108TMHMM:TMhelix
Coordinates (TAIR10) chr2:+:1493009..1496914
Molecular Weight (calculated) 94995.30 Da
IEP (calculated) 6.01
GRAVY (calculated) -0.22
Length 851 amino acids
Sequence (TAIR10)
(BLAST) 		001: MKTHPQAILL CVLFFITFGL LHVVEAGNQE GFISLDCGLS PNEPPYVDAA TDLTYTTDND FVQSGKTGTI DKELESTYNK PILQLRYFPE GVRNCYTLNV
101: TLGTNYLIRA SFVYGNYDGL NKELEFDLYL GPNLWANVNT AVYLMNGVTT EEIIHSTKSK VLQVCLIKTG ESIPIINSLE LRPLINDTYN TQSGSLKYLF
201: RNYFSTSRRI IRYPNDVNDR HWYPFFDEDA WTELTTNLNV NSSNGYDPPK FVMASASTPI SKNAPFNFTW SLIPSTAKFY SYMHFADIQT LQANETREFD
301: MMLNGNLALE RALEVFTVID FPELETNQDD VIAIKNIQNT YGVSKTSWQG DPCVPKRFMW DGLNCNNSYI STPPTITFLN LSSSHLTGII ASAIQNLTHL
401: QNLDLSNNNL TGGVPEFLAG LKSLLVINLS GNNLSGSVPQ TLLQKKGLKL NLEGNIYLNC PDGSCVSKDG NGGAKKKNVV VLVVVSIALV VVLGSALALF
501: LVFRKRKTPR NEVSRTSRSL DPTITTKNRR FTYSEVVKMT NNFEKILGKG GFGMVYHGTV NDAEQVAVKM LSPSSSQGYK EFKAEVELLL RVHHKNLVGL
601: VGYCDEGENL SLIYEYMAKG DLKEHMLGNQ GVSILDWKTR LKIVAESAQG LEYLHNGCKP PMVHRDVKTT NILLDEHFQA KLADFGLSRS FPLEGETRVD
701: TVVAGTPGYL DPEYYRTNWL NEKSDVYSFG IVLLEIITNQ HVINQSREKP HIAEWVGVML TKGDIKSIID PKFSGDYDAG SVWRAVELAM SCVNPSSTGR
801: PTMSQVVIEL NECLASENSR RGMSQNMESK GSIQYTEVST NFGTEYTPEA R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)