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AT2G03150.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:22318864 (2012): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATP/GTP-binding protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
embryo defective 1579 (emb1579); FUNCTIONS IN: binding, calcium ion binding; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: cytosol; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410Z0UJeggNOG:KOG4246EMBL:CP002685EnsemblPlants:AT2G03150EnsemblPlants:AT2G03150.1entrez:814844Gene3D:1.10.238.10
GeneID:814844GO:GO:0005509GO:GO:0005634GO:GO:0005829GO:GO:0006355GO:GO:0055078Gramene:AT2G03150.1
hmmpanther:PTHR14304hmmpanther:PTHR14304:SF11InParanoid:F4IS91InterPro:IPR002048InterPro:IPR011992InterPro:IPR025224InterPro:IPR025954
iPTMnet:F4IS91KEGG:ath:AT2G03150ncoils:CoilOMA:GHQIHDRPANTHER:PTHR14304PaxDb:F4IS91Pfam:PF14443
Pfscan:PS50222PRIDE:F4IS91PROSITE:PS50222ProteinModelPortal:F4IS91Proteomes:UP000006548Reactome:R-ATH-3371453Reactome:R-ATH-72163
RefSeq:NP_178414.2SMART:SM01122SMR:F4IS91STRING:3702.AT2G03150.1SUPFAM:SSF47473TAIR:AT2G03150tair10-symbols:emb1579
UniGene:At.25059UniProt:F4IS91
Coordinates (TAIR10) chr2:+:952313..959004
Molecular Weight (calculated) 150921.00 Da
IEP (calculated) 6.51
GRAVY (calculated) -1.13
Length 1340 amino acids
Sequence (TAIR10)
(BLAST)
0001: MHRDMYSSRG TGYGQQQYGS QSGYSQNLGS GYPGSSVSGG AEGGSQISLS SRHPSITGAP QETDIGGGYR SHLSTAASHY GTQYGSVYGS TSLSSSQPLS
0101: TNGLGSSVLD NRSGYVPTLP DSPKFASGSY LSPSSHGYGQ KTDDLYSDKL SGYIPVDRRQ YGEQSSSYLG RELQNEPTRR YADPSNFARQ TDLYDRIDQA
0201: SLLRGEQLLK MQSLHTSSVD AGVNRQTDYL TERSSTVRHS DQEAMHYGGR LESDPHGLSV RNTSSYASQH TPSLLGAVPR RNLDDYIYPE SSSNPGYGVS
0301: LPPGRDYGTG KGIHSAASLD LDYPGGMLAR GTGAAPRVDD LRKGDRASYL REFDLREEER RREDQRARDK EREREREREH DRERERQRER ERQRARDRER
0401: ERILERREKE RQGERERERK RALEIKRDRT PTARATSKDT KERTPVPKSI SRDARSSSLR RDAHHREASI RRSSPIKPIR RDYVCKVLSS RLVDMERDYV
0501: TLDKRYPRLF VPSEFSKVVV NWPKQKLTLS MHTAVSFEHD YIEDGGADVK STSTKPLALK TGGKSVWNAK MVLMSGLSRT ALEDLASDKF FEDRIPHICN
0601: ILKFAVLKKD HSFMAIGGSW DPTDGMDPSV DQSSLIQTML RHSKDKLHLD LSNCRHWNPF LEIHYDRVGT DGVFSYKEIT VLFVPDLSEC LPSFDVWRTQ
0701: WLAHRKALTE RDRLLSQEVK KDTVEVTKDA EKKSPGDTSG TPTTGTKKTV KKIIKRVVKR PVNDGKATGM KGEKSDVPEH VAIPETTVPK EESTGTSSNK
0801: KIVKKVAETG DTSDPSAKAN EQTPAKTIVK KKIIKRVAKR KVAEIDNKMD GDSKKDGDSD EKKVMEVGKK SSDSGSVEMK PTAESLEDVK DENASKTVDV
0901: KQETGSPDTK KKEGASSSSK KDTKTGEDKK AEKKNNSETM SEGKKIDRNN TDEKEVKEKV TEKEIKERGG KDESRIQVKD RKKCEEPPRA GFILQTKRNK
1001: DSKLRSLSAS LDSLLDYTDK DLDESSFEIS LFAESLYEML QYQMGSRIFE FLKKLRVKIV RQRNQRKRHQ EELSVKQNEA KSQDKRQKTA EHEDKEASVI
1101: SESAPGKDDK ETSGKETVDG SREIADKEAV AKTKETLGSK EVTVGEAVNM EVENQDEEDD DGDDDPEEDP EEDPEEDPEE DPEEDPEECE EMDVANTEQE
1201: EPAEEPQKKE ENLEKTSGTV ADPITEAETD NRKEERGPND SKTEIKPKSE TEKHGKQDGG TSDAAKREET VDKELLQAFR FFDRNQAGYV RVEDMRVTIH
1301: SLGKFLSHRE VKELVQSALL ESNTGRDDRI LYNKLVRLSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)