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AT2G02800.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : protein kinase 2B
Curator
Summary (TAIR10)
Encodes protein kinase APK2b.
Computational
Description (TAIR10)
protein kinase 2B (APK2B); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2A (TAIR:AT1G14370.1); Has 113663 Blast hits to 112197 proteins in 3955 species: Archae - 101; Bacteria - 13127; Metazoa - 42007; Fungi - 9244; Plants - 32902; Viruses - 370; Other Eukaryotes - 15912 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G02800-MONOMERBioCyc:ARA:GQT-2172-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AC002521EMBL:AF428432
EMBL:AK117389EMBL:AY125559EMBL:CP002685EMBL:D88207EnsemblPlants:AT2G02800EnsemblPlants:AT2G02800.1EnsemblPlants:AT2G02800.2
entrez:814810GeneID:814810Genevisible:O49840GO:GO:0004674GO:GO:0005524GO:GO:0005634GO:GO:0005737
GO:GO:0005886GO:GO:0009536Gramene:AT2G02800.1Gramene:AT2G02800.2hmmpanther:PTHR27001hmmpanther:PTHR27001:SF160HOGENOM:HOG000116550
InParanoid:O49840IntAct:O49840InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441
iPTMnet:O49840KEGG:ath:AT2G02800KO:K04733OMA:AQIDSPRPaxDb:O49840Pfam:O49840Pfam:PF07714
Pfscan:PS50011PhylomeDB:O49840PIR:T00848PRIDE:O49840PRO:PR:O49840PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:O49840Proteomes:UP000006548RefSeq:NP_178383.1RefSeq:NP_973403.1scanprosite:PS00107scanprosite:PS00108
SMR:O49840STRING:3702.AT2G02800.1SUPFAM:SSF56112TAIR:AT2G02800tair10-symbols:APK2BUniGene:At.21329UniGene:At.52607
UniProt:O49840
Coordinates (TAIR10) chr2:-:796889..799250
Molecular Weight (calculated) 46291.20 Da
IEP (calculated) 10.18
GRAVY (calculated) -0.38
Length 426 amino acids
Sequence (TAIR10)
(BLAST)
001: MGNCLDSSAK VDSSSHSPHA NSASLSSRVS SKTSRSTVPS SLSINSYSSV ESLPTPRTEG EILSSPNLKA FTFNELKNAT RNFRPDSLLG EGGFGYVFKG
101: WIDGTTLTAS KPGSGIVVAV KKLKTEGYQG HKEWLTEVNY LGQLSHPNLV KLVGYCVEGE NRLLVYEFMP KGSLENHLFR RGAQPLTWAI RMKVAIGAAK
201: GLTFLHDAKS QVIYRDFKAA NILLDAEFNS KLSDFGLAKA GPTGDKTHVS TQVMGTHGYA APEYVATGRL TAKSDVYSFG VVLLELLSGR RAVDKSKVGM
301: EQSLVDWATP YLGDKRKLFR IMDTRLGGQY PQKGAYTAAS LALQCLNPDA KLRPKMSEVL AKLDQLESTK PGTGVGNRQA QIDSPRGSNG SIVQKSPRRY
401: SYDRPLLHIT PGASPLPTHN HSPRVR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)