AT2G02780.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G14390.1); Has 90498 Blast hits to 51050 proteins in 1587 species: Archae - 36; Bacteria - 4349; Metazoa - 18583; Fungi - 1583; Plants - 60249; Viruses - 102; Other Eukaryotes - 5596 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:781932..784646 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 82006.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.96 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.08 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 742 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQISLQIHLS SFTFLLLIFL LPVLSESQVA SSESQTLLEI QKQLQYPQVL QSWTDTTNFC HIRPSPSLRI ICLHGHVTEL TVTGNRTSKL SGSFHKLFTL 101: LTQLSSLKTL SLTSLGISGS LSPKIITKLS PSLESLNLSS NFISGKIPEE IVSLKNLKSL VLRDNMFWGF VSDDLRGLSN LQELDLGGNK LGPEVPSLPS 201: KLTTVSLKNN SFRSKIPEQI KKLNNLQSLD LSSNEFTGSI PEFLFSIPSL QILSLDQNLL SGSLPNSSCT SSKIITLDVS HNLLTGKLPS CYSSKSFSNQ 301: TVLFSFNCLS LIGTPNAKYQ RPLSFCQNQA SKAIAVEPIP KAKDKDSARI KLGLVILIII GVIILAAILV LLVLIALKRR RSRSEDDPFE VNNSNNERHA 401: SDKVSVCSTT TASSKSLPDS RRVPQTMRSA VIGLPPYRVF SLEELEEATN DFDAASLFCE QLYRGCLREG IPVTVRVIKL KQKSLPQSLA QQMEVLSKLR 501: HMHLVSVLGH SIASNQDHNQ HAGHTIFIVQ EYISSGSLRD FLTNCRKKEV LKWPQRMAIA IGVARGIQFL HMGVAPGIFG NNLKIENIML DETLTVKISG 601: YTIPLPSKVG EERPQAKKPR SNEDREKEDV YQFGVILLQI ITGKVVAAGS SEMGSLKLQL ENGLRDEPSV LSSLADPSVK GSYAYESLRT TVEFAINCLC 701: EDQSKRPSIE DVVWNLQYTI QVQQGWRPSS GNHESSMKAI YE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)