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AT2G02710.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.995
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : PAS/LOV protein B
Curator
Summary (TAIR10)
Encodes a putative blue light receptor protein.
Computational
Description (TAIR10)
PAS/LOV protein B (PLPB); FUNCTIONS IN: two-component sensor activity, signal transducer activity; INVOLVED IN: signal transduction, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: PAC motif (InterPro:IPR001610), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), PAS-associated, C-terminal (InterPro:IPR000700); BEST Arabidopsis thaliana protein match is: phototropin 2 (TAIR:AT5G58140.4); Has 7028 Blast hits to 3884 proteins in 881 species: Archae - 167; Bacteria - 4096; Metazoa - 907; Fungi - 432; Plants - 1066; Viruses - 0; Other Eukaryotes - 360 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1510-MONOMERBioCyc:ARA:GQT-1511-MONOMERBioCyc:ARA:GQT-1512-MONOMERBioGrid:202eggNOG:COG2202eggNOG:ENOG410IGCEEMBL:AB038798
EMBL:AC002521EMBL:AY045642EMBL:AY058232EMBL:CP002685EnsemblPlants:AT2G02710EnsemblPlants:AT2G02710.1entrez:814800
GeneID:814800Genevisible:O64511GO:GO:0000155GO:GO:0004674GO:GO:0005737GO:GO:0006468GO:GO:0009881
GO:GO:0018298GO:GO:0035556hmmpanther:PTHR24351HOGENOM:HOG000030664InParanoid:O64511IntAct:O64511InterPro:IPR000014
InterPro:IPR000700InterPro:IPR001610iPTMnet:O64511KEGG:ath:AT2G02710OMA:RSIMEIRPaxDb:O64511Pfam:O64511
Pfam:PF13426Pfscan:PS50112Pfscan:PS50113PhylomeDB:O64511PIR:T00857PRO:PR:O64511PROSITE:PS50112
PROSITE:PS50113ProteinModelPortal:O64511Proteomes:UP000006548RefSeq:NP_565288.1RefSeq:NP_849928.1RefSeq:NP_973401.1SMART:SM00086
SMART:SM00091SMR:O64511STRING:3702.AT2G02710.1SUPFAM:SSF55785TAIR:AT2G02710tair10-symbols:PLPtair10-symbols:PLPB
TIGRfam:TIGR00229TIGRFAMs:TIGR00229UniGene:At.12414UniProt:O64511
Coordinates (TAIR10) chr2:-:758812..760608
Molecular Weight (calculated) 44892.70 Da
IEP (calculated) 7.06
GRAVY (calculated) -0.26
Length 399 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLTKSSESV FTEEEEEDSF SGRYTLWIKE ALEELPHNFT ITDPFISGHP IVFASLGFLK MTGYSREEVI GRNGKVFQGP KTNRRSIMEI REAIREERSV
101: QVSLLNYRKS GSPFWMLFHM CPVFGKDDGK VTNFVAVQVP ISGREHHRKK LRNVGDLSSD TSPTFGSCRR EVCFGNFVCQ DRALPVECDD DEQGLEDWEQ
201: CEASESEKLK ATEAINNVLS ILVHYSELSG RLVCGKRYCL RGVDCLSSSL VISLGRIKQS FVLTNPCLPD MPIIYASDAF LTLTGYKRQE VLGQNCRFLS
301: GVDTDSSVLY EMKECILKGQ SCTVQILNYS NRKDKSSFWN LLHISPVRNA SGKTAYFVGV QVEASCRNTE IKELRPETRQ LSVVGAVRVA VRSSLMVTC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)