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AT2G02440.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.631
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 3 Blast hits to 3 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC005312EMBL:CP002685EnsemblPlants:AT2G02440EnsemblPlants:AT2G02440.1
entrez:814774GeneID:814774GO:GO:0016021Gramene:AT2G02440.1
KEGG:ath:AT2G02440PIR:F84436Proteomes:UP000006548RefSeq:NP_178348.1
TAIR:AT2G02440TMHMM:TMhelixUniGene:At.52601UniProt:Q9ZVP9
Coordinates (TAIR10) chr2:+:638012..639305
Molecular Weight (calculated) 14897.20 Da
IEP (calculated) 4.86
GRAVY (calculated) -0.63
Length 138 amino acids
Sequence (TAIR10)
(BLAST)
001: MLTGGGGVEC RHEEFDSGDE RRSEHGEEGG YHSVCSTSGE DGGEKFCSSS KPKPKKFVSA NPHSLFGGGV DLFSLVIIAV IFVVIVHVFL RIEGRGDGGD
101: SENYMLTEDQ STKTTDKKPD TEALMAENQS TKTTDHKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)