suba logo
AT2G01950.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
golgi 0.962
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : BRI1-like 2
Curator
Summary (TAIR10)
Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein.
Computational
Description (TAIR10)
BRI1-like 2 (BRL2); FUNCTIONS IN: protein binding, protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1 like (TAIR:AT1G55610.2); Has 216585 Blast hits to 138440 proteins in 4665 species: Archae - 155; Bacteria - 20149; Metazoa - 71991; Fungi - 10737; Plants - 87183; Viruses - 376; Other Eukaryotes - 25994 (source: NCBI BLink).
Protein Annotations
BioGrid:129eggNOG:COG4886eggNOG:ENOG410IE1YEMBL:FJ708687EnsemblPlants:AT2G01950EnsemblPlants:AT2G01950.1entrez:814726
ExpressionAtlas:C0LGJ7Gene3D:2.60.120.200Gene3D:3.80.10.10GeneID:814726GO:GO:0004674GO:GO:0005524GO:GO:0016021
Gramene:AT2G01950.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF5InterPro:IPR000719InterPro:IPR001611InterPro:IPR003591InterPro:IPR008271
InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441InterPro:IPR032675KEGG:ath:AT2G01950OMA:RNACASL
PaxDb:C0LGJ7Pfam:PF00069Pfam:PF08263Pfam:PF13855Pfam:Q9ZPS9Pfscan:PS50011Pfscan:PS51450
PhylomeDB:C0LGJ7PRIDE:C0LGJ7PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51450ProteinModelPortal:C0LGJ7
RefSeq:NP_178304.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMART:SM00369SMR:C0LGJ7STRING:3702.AT2G01950.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT2G01950tair10-symbols:BRL2tair10-symbols:VH1TMHMM:TMhelixUniGene:At.13922
UniProt:C0LGJ7UniProt:Q9ZPS9
Coordinates (TAIR10) chr2:-:440805..444236
Molecular Weight (calculated) 125683.00 Da
IEP (calculated) 6.97
GRAVY (calculated) -0.12
Length 1143 amino acids
Sequence (TAIR10)
(BLAST)
0001: MTTSPIRVRI RTRIQISFIF LLTHLSQSSS SDQSSLKTDS LSLLSFKTMI QDDPNNILSN WSPRKSPCQF SGVTCLGGRV TEINLSGSGL SGIVSFNAFT
0101: SLDSLSVLKL SENFFVLNST SLLLLPLTLT HLELSSSGLI GTLPENFFSK YSNLISITLS YNNFTGKLPN DLFLSSKKLQ TLDLSYNNIT GPISGLTIPL
0201: SSCVSMTYLD FSGNSISGYI SDSLINCTNL KSLNLSYNNF DGQIPKSFGE LKLLQSLDLS HNRLTGWIPP EIGDTCRSLQ NLRLSYNNFT GVIPESLSSC
0301: SWLQSLDLSN NNISGPFPNT ILRSFGSLQI LLLSNNLISG DFPTSISACK SLRIADFSSN RFSGVIPPDL CPGAASLEEL RLPDNLVTGE IPPAISQCSE
0401: LRTIDLSLNY LNGTIPPEIG NLQKLEQFIA WYNNIAGEIP PEIGKLQNLK DLILNNNQLT GEIPPEFFNC SNIEWVSFTS NRLTGEVPKD FGILSRLAVL
0501: QLGNNNFTGE IPPELGKCTT LVWLDLNTNH LTGEIPPRLG RQPGSKALSG LLSGNTMAFV RNVGNSCKGV GGLVEFSGIR PERLLQIPSL KSCDFTRMYS
0601: GPILSLFTRY QTIEYLDLSY NQLRGKIPDE IGEMIALQVL ELSHNQLSGE IPFTIGQLKN LGVFDASDNR LQGQIPESFS NLSFLVQIDL SNNELTGPIP
0701: QRGQLSTLPA TQYANNPGLC GVPLPECKNG NNQLPAGTEE GKRAKHGTRA ASWANSIVLG VLISAASVCI LIVWAIAVRA RRRDADDAKM LHSLQAVNSA
0801: TTWKIEKEKE PLSINVATFQ RQLRKLKFSQ LIEATNGFSA ASMIGHGGFG EVFKATLKDG SSVAIKKLIR LSCQGDREFM AEMETLGKIK HRNLVPLLGY
0901: CKIGEERLLV YEFMQYGSLE EVLHGPRTGE KRRILGWEER KKIAKGAAKG LCFLHHNCIP HIIHRDMKSS NVLLDQDMEA RVSDFGMARL ISALDTHLSV
1001: STLAGTPGYV PPEYYQSFRC TAKGDVYSIG VVMLEILSGK RPTDKEEFGD TNLVGWSKMK AREGKHMEVI DEDLLKEGSS ESLNEKEGFE GGVIVKEMLR
1101: YLEIALRCVD DFPSKRPNML QVVASLRELR GSENNSHSHS NSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)