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AT2G01770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27240439 (2017): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : vacuolar iron transporter 1
Curator
Summary (TAIR10)
Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.
Computational
Description (TAIR10)
vacuolar iron transporter 1 (VIT1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF125, transmembrane (InterPro:IPR008217); Has 1947 Blast hits to 1945 proteins in 688 species: Archae - 106; Bacteria - 1196; Metazoa - 0; Fungi - 163; Plants - 191; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink).
Protein Annotations
BioGrid:111eggNOG:COG1814eggNOG:KOG4473EMBL:AC006069
EMBL:AY316134EMBL:BT028987EMBL:CP002685EnsemblPlants:AT2G01770
EnsemblPlants:AT2G01770.1entrez:814708GeneID:814708Genevisible:Q9ZUA5
GO:GO:0005384GO:GO:0005774GO:GO:0006880GO:GO:0016021
GO:GO:0030026GO:GO:0055072GO:GO:0071281GO:GO:0071421
Gramene:AT2G01770.1hmmpanther:PTHR31851hmmpanther:PTHR31851:SF9HOGENOM:HOG000096548
InParanoid:Q9ZUA5IntAct:Q9ZUA5InterPro:IPR008217KEGG:ath:AT2G01770
OMA:KWVDFMMPaxDb:Q9ZUA5Pfam:PF01988Pfam:Q9ZUA5
PhylomeDB:Q9ZUA5PIR:H84428PRO:PR:Q9ZUA5Proteomes:UP000006548
RefSeq:NP_178286.1STRING:3702.AT2G01770.1TAIR:AT2G01770tair10-symbols:ATVIT1
tair10-symbols:VIT1TCDB:2.A.89.1.2TMHMM:TMhelixUniGene:At.52589
UniProt:Q9ZUA5
Coordinates (TAIR10) chr2:-:334775..336425
Molecular Weight (calculated) 26861.50 Da
IEP (calculated) 4.98
GRAVY (calculated) 0.29
Length 250 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM
101: KREQEEIVAV PETEAAEVAE ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG FIPLLPYMLI PHAMDAVVAS
201: VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA AFCLAKVVQH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)