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AT2G01760.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : response regulator 14
Curator
Summary (TAIR10)
member of Response Regulator: B- Type
Computational
Description (TAIR10)
response regulator 14 (RR14); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 95871 Blast hits to 95103 proteins in 2981 species: Archae - 533; Bacteria - 85361; Metazoa - 37; Fungi - 351; Plants - 2714; Viruses - 3; Other Eukaryotes - 6872 (source: NCBI BLink).
Protein Annotations
BioGrid:110eggNOG:COG0745eggNOG:ENOG410IMXQEMBL:AC006069EMBL:AY088149EMBL:AY099726EMBL:AY128887
EMBL:CP002685EnsemblPlants:AT2G01760EnsemblPlants:AT2G01760.1entrez:814707Gene3D:1.10.10.60GeneID:814707Genevisible:Q8L9Y3
GO:GO:0000156GO:GO:0003677GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0009736GO:GO:0042802
Gramene:AT2G01760.1hmmpanther:PTHR26402hmmpanther:PTHR26402:SF584HOGENOM:HOG000034077InParanoid:Q8L9Y3IntAct:Q8L9Y3InterPro:IPR001005
InterPro:IPR001789InterPro:IPR006447InterPro:IPR009057InterPro:IPR011006InterPro:IPR017053InterPro:IPR017930KEGG:ath:AT2G01760
KO:K14491OMA:VNEESWIPaxDb:Q8L9Y3Pfam:PF00072Pfam:PF00249Pfam:Q8L9Y3Pfscan:PS50110
Pfscan:PS51294PhylomeDB:Q8L9Y3PIR:G84428PIRSF:PIRSF036392PRIDE:Q8L9Y3PRO:PR:Q8L9Y3PROSITE:PS50110
PROSITE:PS51294ProteinModelPortal:Q8L9Y3Proteomes:UP000006548RefSeq:NP_178285.1SMART:SM00448SMR:Q8L9Y3STRING:3702.AT2G01760.1
SUPFAM:SSF46689SUPFAM:SSF52172TAIR:AT2G01760tair10-symbols:ARR14tair10-symbols:RR14TIGRfam:TIGR01557TIGRFAMs:TIGR01557
UniGene:At.42470UniProt:Q8L9Y3
Coordinates (TAIR10) chr2:+:333041..334514
Molecular Weight (calculated) 43101.60 Da
IEP (calculated) 8.58
GRAVY (calculated) -0.46
Length 382 amino acids
Sequence (TAIR10)
(BLAST)
001: MPINDQFPSG LRILVVDDDT SCLFILEKML LRLMYQVTIC SQADVALTIL RERKDSFDLV LSDVHMPGMN GYNLLQQVGL LEMDLPVIMM SVDGRTTTVM
101: TGINHGACDY LIKPIRPEEL KNIWQHVVRR KCVMKKELRS SQALEDNKNS GSLETVVVSV SECSEESLMK CRNKKKKKKR SVDRDDNEDD LLLDPGNSKK
201: SRVVWSIELH QQFVNAVNKL GIDKAVPKRI LELMNVPGLS RENVASHLQK FRLYLKRLSG EASQSNDSES TKRYENIQAL VSSGQLHPQT LAALFGQPID
301: NHHSASFGVW IPNDNLGRSQ NEHFSVDVSS ASNRPVSVAV HGLSSSANFR QRGDVNNNRI RQGYGSNVNE ESWILERSSR QR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)