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AT2G01630.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : plasma membrane 12805588
AmiGO : plasma membrane 16618929
AmiGO : plasma membrane 17317660
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 17317660
TAIR : plasma membrane 16618929
TAIR : plasma membrane 12805588
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:22923678 (2012): plasma membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16618929 (2006): plasma membrane
  • PMID:16602701 (2006): plasma membrane
  • PMID:16356755 (2006): extracellular region
  • PMID:14517339 (2003): plasma membrane
  • PMID:12805588 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : O-Glycosyl hydrolases family 17 protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT1G66250.1); Has 2926 Blast hits to 2856 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 93; Plants - 2819; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G01630-MONOMERBioCyc:ARA:GQT-2626-MONOMERCAZy:CBM43CAZy:GH17EC:3.2.1.39eggNOG:ENOG410IEQ4eggNOG:ENOG410ZF4V
EMBL:AC006069EMBL:AY085500EMBL:CP002685EnsemblPlants:AT2G01630EnsemblPlants:AT2G01630.1entrez:814692ExpressionAtlas:Q9ZU91
Gene3D:3.20.20.80GeneID:814692Genevisible:Q9ZU91GO:GO:0005886GO:GO:0005975GO:GO:0006952GO:GO:0031225
GO:GO:0042973GO:GO:0046658hmmpanther:PTHR32227hmmpanther:PTHR32227:SF61HOGENOM:HOG000238220InParanoid:Q9ZU91InterPro:IPR000490
InterPro:IPR012946InterPro:IPR013781InterPro:IPR017853OMA:PLQANKEPaxDb:Q9ZU91Pfam:PF00332Pfam:PF07983
Pfam:Q9ZU91PhylomeDB:Q9ZU91PIR:B84427PRIDE:Q9ZU91PRO:PR:Q9ZU91PROSITE:PS00587ProteinModelPortal:Q9ZU91
Proteomes:UP000006548RefSeq:NP_565269.1scanprosite:PS00587SMART:SM00768SMR:Q9ZU91SUPFAM:SSF51445TAIR:AT2G01630
UniGene:At.27628UniGene:At.42475UniGene:At.75580UniProt:Q9ZU91
Coordinates (TAIR10) chr2:-:279541..281955
Molecular Weight (calculated) 53995.20 Da
IEP (calculated) 6.17
GRAVY (calculated) 0.10
Length 501 amino acids
Sequence (TAIR10)
(BLAST)
001: MAALLLLFLF LFASSALSQD SLIGVNIGTE VTNMPSPTQV VALLKSQNIN RVRLYDADRS MLLAFAHTGV QVIISVPNDQ LLGISQSNAT AANWVTRNVA
101: AYYPATNITT IAVGSEVLTS LTNAASVLVS ALKYIQAALV TANLDRQIKV STPHSSTIIL DSFPPSQAFF NKTWDPVIVP LLKFLQSTGS PLLLNVYPYF
201: DYVQSNGVIP LDYALFQPLQ ANKEAVDANT LLHYTNVFDA IVDAAYFAMS YLNFTNIPIV VTESGWPSKG GPSEHDATVE NANTYNSNLI QHVINKTGTP
301: KHPGTAVTTY IYELYNEDTR PGPVSEKNWG LFYTNGTPVY TLRLAGAGAI LANDTTNQTF CIAKEKVDRK MLQAALDWAC GPGKVDCSAL MQGESCYEPD
401: DVVAHSTYAF NAYYQKMGKA SGSCDFKGVA TVTTTDPSRG TCVFPGSAKS NQTLGNNTSA LAPSANSTTS GCIPKYYHHP HASFGDLTLL SLLLIIALVF
501: L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)