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AT2G01600.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ENTH/ANTH/VHS superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G14910.1); Has 1020 Blast hits to 994 proteins in 190 species: Archae - 0; Bacteria - 14; Metazoa - 316; Fungi - 202; Plants - 440; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQ90eggNOG:KOG0251EMBL:AC005560EMBL:AC006069EMBL:AF424593EMBL:AY087211EMBL:AY096639
EMBL:AY133828EMBL:CP002685EnsemblPlants:AT2G01600EnsemblPlants:AT2G01600.1entrez:814689Gene3D:1.20.58.150Gene3D:1.25.40.90
GeneID:814689Genevisible:Q8LBH2GO:GO:0005545GO:GO:0005794GO:GO:0005886GO:GO:0005905GO:GO:0006897
GO:GO:0016020GO:GO:0030136GO:GO:0048268Gramene:AT2G01600.1hmmpanther:PTHR22951hmmpanther:PTHR22951:SF25HOGENOM:HOG000238535
InParanoid:Q8LBH2InterPro:IPR008942InterPro:IPR011417InterPro:IPR013809InterPro:IPR014712KEGG:ath:AT2G01600OMA:AKHEAIT
PaxDb:Q8LBH2Pfam:PF07651Pfam:Q8LBH2Pfscan:PS50942PhylomeDB:Q8LBH2PIR:G84426PRIDE:Q8LBH2
PRO:PR:Q8LBH2PROSITE:PS50942ProteinModelPortal:Q8LBH2Proteomes:UP000006548RefSeq:NP_565267.1SMART:SM00273STRING:3702.AT2G01600.1
SUPFAM:SSF48464SUPFAM:SSF89009TAIR:AT2G01600UniGene:At.13456UniProt:Q8LBH2
Coordinates (TAIR10) chr2:+:268975..272356
Molecular Weight (calculated) 63632.30 Da
IEP (calculated) 4.91
GRAVY (calculated) -0.51
Length 571 amino acids
Sequence (TAIR10)
(BLAST)
001: MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR
101: EGDPTFREEL LNFSQRGRIL QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT RDLDGEELLE QLPALQQLLY
201: RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL
301: TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL
401: AIVSTDADPP TPHFGQPNNY DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA SHDPFASSNG TAPPPQQQAV
501: NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)