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AT2G01580.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.823
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWU3eggNOG:ENOG4111VJPEMBL:AC005560EMBL:BT010851
EMBL:BT011322EMBL:CP002685EnsemblPlants:AT2G01580EnsemblPlants:AT2G01580.1
entrez:814687GeneID:814687GO:GO:0016021Gramene:AT2G01580.1
hmmpanther:PTHR33430hmmpanther:PTHR33430:SF5HOGENOM:HOG000240599IntAct:Q9ZVE8
KEGG:ath:AT2G01580OMA:TECSAGRPhylomeDB:Q9ZVE8PIR:E84426
Proteomes:UP000006548RefSeq:NP_178267.1TAIR:AT2G01580TMHMM:TMhelix
UniGene:At.42478UniProt:Q9ZVE8
Coordinates (TAIR10) chr2:-:265181..265756
Molecular Weight (calculated) 20440.60 Da
IEP (calculated) 4.65
GRAVY (calculated) 0.62
Length 191 amino acids
Sequence (TAIR10)
(BLAST)
001: MADSDIETSS NQNSNSNTSH STTSTTSVHV TALDGIVSAN SLFTVAVFVG ISFDQPSDLT LTDRTECSAG RDVERDLVVF EVISFAFFLF SSLVAQGMKL
101: AINLLNSKET DEVFKANINR DVLRFGVVGA AGGSILGCVF LLLSIVDVIQ LRLGLLSCGN ALAIHTVLVL VVLVSSALSV YIFTVFYSFR K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)