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AT2G01520.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.965
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:15694452 (2005): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : MLP-like protein 328
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
MLP-like protein 328 (MLP328); FUNCTIONS IN: copper ion binding; INVOLVED IN: response to zinc ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT4G14060.1); Has 369 Blast hits to 340 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 369; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:84eggNOG:ENOG410JF95eggNOG:ENOG41113R7EMBL:AC005560
EMBL:AF458339EMBL:AJ306147EMBL:AY054247EMBL:AY085745
EMBL:CP002685EnsemblPlants:AT2G01520EnsemblPlants:AT2G01520.1entrez:814681
Gene3D:3.30.530.20GeneID:814681Genevisible:Q9ZVF3GO:GO:0005507
GO:GO:0005829GO:GO:0006952GO:GO:0009607GO:GO:0010043
GO:GO:0010228GO:GO:0080184Gramene:AT2G01520.1HOGENOM:HOG000239987
InParanoid:Q9ZVF3IntAct:Q9ZVF3InterPro:IPR000916InterPro:IPR023393
iPTMnet:Q9ZVF3KEGG:ath:AT2G01520OMA:NDDENMAPaxDb:Q9ZVF3
Pfam:PF00407Pfam:Q9ZVF3PhylomeDB:Q9ZVF3PIR:G84425
PRIDE:Q9ZVF3PRO:PR:Q9ZVF3ProteinModelPortal:Q9ZVF3Proteomes:UP000006548
RefSeq:NP_565264.1SMART:SM01037SMR:Q9ZVF3STRING:3702.AT2G01520.1
SUPFAM:SSF55961TAIR:AT2G01520tair10-symbols:MLP328UniGene:At.13152
UniProt:Q9ZVF3
Coordinates (TAIR10) chr2:+:235992..236881
Molecular Weight (calculated) 17513.80 Da
IEP (calculated) 5.53
GRAVY (calculated) -0.60
Length 151 amino acids
Sequence (TAIR10)
(BLAST)
001: MATSGTYVTE VPLKGSAEKH YKRWRSENHL FPDAIGHHIQ GVTIHDGEWD SHGAIKIWNY TCDGKPEVFK ERREIDDENM AVTFRGLEGH VMEQLKVYDV
101: IFQFIQKSPD DIICKITMIW EKQNDDMPEP SNYMKFVKSL AADMDDHVLK A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)