AT2G01210.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast stroma, chloroplast, plasma membrane, plant-type cell wall; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G25320.1); Has 133812 Blast hits to 98087 proteins in 4104 species: Archae - 103; Bacteria - 11207; Metazoa - 34549; Fungi - 6957; Plants - 66297; Viruses - 188; Other Eukaryotes - 14511 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:119509..121734 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78311.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.01 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.12 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 716 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLASLIIFVA LLCNVTVISG LNDEGFALLT FKQSVHDDPT GSLNNWNSSD ENACSWNGVT CKELRVVSLS IPRKNLYGSL PSSLGFLSSL RHLNLRSNRF 101: YGSLPIQLFH LQGLQSLVLY GNSFDGSLSE EIGKLKLLQT LDLSQNLFNG SLPLSILQCN RLKTLDVSRN NLSGPLPDGF GSAFVSLEKL DLAFNQFNGS 201: IPSDIGNLSN LQGTADFSHN HFTGSIPPAL GDLPEKVYID LTFNNLSGPI PQTGALMNRG PTAFIGNTGL CGPPLKDLCQ GYQLGLNASY PFIPSNNPPE 301: DSDSTNSETK QKSSGLSKSA VIAIVLCDVF GICLVGLLFT YCYSKFCACN RENQFGVEKE SKKRASECLC FRKDESETPS ENVEHCDIVP LDAQVAFNLE 401: ELLKASAFVL GKSGIGIVYK VVLENGLTLA VRRLGEGGSQ RFKEFQTEVE AIGKLKHPNI ASLRAYYWSV DEKLLIYDYV SNGNLATALH GKPGMMTIAP 501: LTWSERLRIM KGIATGLVYL HEFSPKKYVH GDLKPSNILI GQDMEPKISD FGLARLANIA GGSSPTIQSN RIIQTDQQPQ ERQQHHHKSV SSEFTAHSSS 601: GSYYQAPETL KMVKPSQKWD VYSYGIILLE LIAGRSPAVE VGTSEMDLVR WVQVCIEEKK PLCDVLDPCL APEAETEDEI VAVLKIAISC VNSSPEKRPT 701: MRHVSDTLDR LPVAGD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)