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AT2G01180.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.981
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphatidic acid phosphatase 1
Curator
Summary (TAIR10)
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational
Description (TAIR10)
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-60-MONOMERBioCyc:ARA:MONOMER-AT2G01180BioCyc:MetaCyc:MONOMER-AT2G01180BioGrid:50EC:3.1.3.-eggNOG:COG0671eggNOG:KOG3030
EMBL:AB004318EMBL:AB053949EMBL:AC006200EMBL:AF412050EMBL:AY085869EMBL:AY143886EMBL:BX819931
EMBL:CP002685EnsemblPlants:AT2G01180EnsemblPlants:AT2G01180.1EnsemblPlants:AT2G01180.2entrez:814646ExpressionAtlas:Q9ZU49Gene3D:1.20.144.10
GeneID:814646Genevisible:Q9ZU49GO:GO:0005886GO:GO:0005887GO:GO:0006644GO:GO:0007165GO:GO:0008195
GO:GO:0009626GO:GO:0010224GO:GO:0046839hmmpanther:PTHR10165hmmpanther:PTHR10165:SF80HOGENOM:HOG000215098InParanoid:Q9ZU49
InterPro:IPR000326InterPro:IPR028681iPTMnet:Q9ZU49KEGG:00051+3.1.3.-KEGG:00332+3.1.3.-KEGG:00565+3.1.3.-KEGG:00600+3.1.3.-
KEGG:00730+3.1.3.-KEGG:00740+3.1.3.-KEGG:00760+3.1.3.-KEGG:ath:AT2G01180MINT:MINT-8068478OMA:PYAYFKAPANTHER:PTHR10165:SF80
PaxDb:Q9ZU49Pfam:PF01569Pfam:Q9ZU49PhylomeDB:Q9ZU49PIR:E84421PRIDE:Q9ZU49PRO:PR:Q9ZU49
ProteinModelPortal:Q9ZU49Proteomes:UP000006548Reactome:R-ATH-2029485RefSeq:NP_565255.1RefSeq:NP_973389.1SMART:SM00014STRING:3702.AT2G01180.1
SUPFAM:SSF48317TAIR:AT2G01180tair10-symbols:ATLPP1tair10-symbols:ATPAP1tair10-symbols:LPP1tair10-symbols:PAP1TMHMM:TMhelix
UniGene:At.10548UniProt:Q9ZU49
Coordinates (TAIR10) chr2:-:107182..108555
Molecular Weight (calculated) 36685.40 Da
IEP (calculated) 8.28
GRAVY (calculated) 0.10
Length 327 amino acids
Sequence (TAIR10)
(BLAST)
001: MTIGSFFSSL LFWRNSQDQE AQRGRMQEID LSVHTIKSHG GRVASKHKHD WIILVILIAI EIGLNLISPF YRYVGKDMMT DLKYPFKDNT VPIWSVPVYA
101: VLLPIIVFVC FYLKRTCVYD LHHSILGLLF AVLITGVITD SIKVATGRPR PNFYWRCFPD GKELYDALGG VVCHGKAAEV KEGHKSFPSG HTSWSFAGLT
201: FLSLYLSGKI KAFNNEGHVA KLCLVIFPLL AACLVGISRV DDYWHHWQDV FAGALIGTLV AAFCYRQFYP NPYHEEGWGP YAYFKAAQER GVPVTSSQNG
301: DALRAMSLQM DSTSLENMES GTSTAPR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)