AT1G80870.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G51770.1); Has 92712 Blast hits to 76168 proteins in 3269 species: Archae - 56; Bacteria - 7291; Metazoa - 26312; Fungi - 5337; Plants - 43631; Viruses - 173; Other Eukaryotes - 9912 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:30392133..30394211 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78554.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.50 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.55 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 692 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPSRPNPTRP KLFHNRTKTL FLILTISSSL VIFFAILYFI YHLWISLLNR SRTIPFDVAA ASPLKLQLFT YKELKLATND FDESNVIGKG GSGTVFRGIT 101: RDGKLFAVKR LDNLSIQTET EFQNELQILG GLKSSFLVTL LGYCVEKNHR FLIYEYMPNK SLQELLFNED GDSCLNWERR FGIILDVAKA LEFMHFGCDP 201: PVIHGDIKPS NVLLDSEFRA KISDFGLSRV KVEGGYGVDL FSQELSGNFG GESTPQTAIG TPTHHEVDFA LALQASSSSK NSRTSRNIKE MSLNSMSLAM 301: DGETKGKEVS NDVVLSCEDH EFDQGKEMNL LSPNSVLDLG KGSKQWGRDW WWKQEGSGEL CSKDYVREWI GSQIDTANPD WDDDKKVITT PELGVSTRTI 401: DKAEHRDESG LNESRFDTLE EKFAKEEISE RKNKRSKNKK KKHRNMEEWW KEEEHQEEMN NKKKIGVLRI KFKNHLKFPH FRYCFRQKGE NSVHDREGEA 501: AGEFSFRRGW RRKSNSSSKK KKKNNNGSMG SEMWSGDLFS RELSSTTSMR GTLCYIAPEY GGGCCYLMEK GDIYSFGVLI LVIVSGRRPL HVLASPMKLE 601: KANLVSWCRQ LAQSGNVLEL VDEKLKDGYN KEEAGLCINL ALACLQKAPE LRPDVSEVVR ILRGEMDISS TAFEFSPSPP GKVYGSRSKR RS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)