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AT1G80600.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HOPW1-1-interacting 1
Curator
Summary (TAIR10)
Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).
Computational
Description (TAIR10)
HOPW1-1-interacting 1 (WIN1); FUNCTIONS IN: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity, copper ion binding; INVOLVED IN: defense response to bacterium; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Acetylornithine/succinylornithine aminotransferase (InterPro:IPR004636), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: ornithine-delta-aminotransferase (TAIR:AT5G46180.1); Has 36928 Blast hits to 36904 proteins in 2775 species: Archae - 735; Bacteria - 23598; Metazoa - 655; Fungi - 914; Plants - 410; Viruses - 17; Other Eukaryotes - 10599 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G80600-MONOMEREC:2.6.1.11eggNOG:COG4992eggNOG:KOG1401EMBL:AC018849EMBL:AK220871EMBL:AY054594
EMBL:AY085912EMBL:BT002584EMBL:CP002684EMBL:EU214908EnsemblPlants:AT1G80600EnsemblPlants:AT1G80600.1entrez:844399
Gene3D:3.40.640.10Gene3D:3.90.1150.10GeneID:844399Genevisible:Q9M8M7GO:GO:0003992GO:GO:0005507GO:GO:0005739
GO:GO:0005829GO:GO:0006526GO:GO:0009507GO:GO:0009570GO:GO:0030170GO:GO:0042742GO:GO:0042802
GO:GO:0044419GO:GO:0048364GO:GO:0080022Gramene:AT1G80600.1gramene_pathway:2.6.1.11gramene_pathway:ARGSYNBSUB-PWYgramene_pathway:GLUTORN-PWY
gramene_plant_reactome:1119539gramene_plant_reactome:6873633HAMAP:MF_01107hmmpanther:PTHR11986hmmpanther:PTHR11986:SF92HOGENOM:HOG000020206InParanoid:Q9M8M7
InterPro:IPR004636InterPro:IPR005814InterPro:IPR015421InterPro:IPR015422InterPro:IPR015424KEGG:ath:AT1G80600KO:K00818
ncoils:CoilOMA:TGKMWGYPANTHER:PTHR11986PaxDb:Q9M8M7Pfam:PF00202Pfam:Q9M8M7PhylomeDB:Q9M8M7
PIR:B96838PRIDE:Q9M8M7PRO:PR:Q9M8M7PROSITE:PS00600ProteinModelPortal:Q9M8M7Proteomes:UP000006548RefSeq:NP_178175.1
scanprosite:PS00600SMR:Q9M8M7STRING:3702.AT1G80600.1SUPFAM:SSF53383TAIR:AT1G80600tair10-symbols:WIN1TIGRfam:TIGR00707
TIGRFAMs:TIGR00707UniGene:At.46389UniGene:At.75567UniPathway:UPA00068UniProt:Q9M8M7
Coordinates (TAIR10) chr1:-:30298675..30300513
Molecular Weight (calculated) 48829.90 Da
IEP (calculated) 6.78
GRAVY (calculated) 0.12
Length 457 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLSQITLP RAPSSEIGLL RRRLERPIIR TRIGFNGRIA SVLTNAGDQA VSVKASVSQK VIEEEAKVIV GTYARAPVVL SSGKGCKLFD PEGKEYLDCA
101: SGIAVNALGH GDPDWLRAVT EQAGVLAHVS NVYYTIPQIE LAKRLVASSF ADRVFFCNSG TEANEAAIKF SRKFQRFTHP EDKEVATGFI AFTNSFHGRT
201: LGALALTSKE QYRTPFEPIM PGVTFLEYGN IQAATDLIRS GKIAAVFVEP IQGEGGIYSA TKEFLQSLRS ACDAAGSLLV FDEVQCGLGR TGLMWAYEAF
301: GVTPDIMTVA KPLAGGLPIG AVLVTEKVAE TINYGDHGST FAGSPLVCSA AIAVMDKVSK PSFLSSVSNK GRYFRDLLVK KLGGNSHVKE VRGEGLIIGV
401: ELDVPASSLV DACRDSGLLI LTAGKGNVVR IVPPLVISEE EIERAVEIMS QNLTALD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)