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AT1G80100.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.867
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : histidine phosphotransfer protein 6
Curator
Summary (TAIR10)
AHP6 lacks the conserved histidine residue (Asn83 in AHP6b), which is required for phosphotransfer, present in the other AHPs. AHP6 does not appear to have phosphotransfer activity. Acts as an inhibitor of cytokinin signaling by interacting with the phosphorelay machinery. Expressed in developing protoxylem and associated pericycle cell files. Negative regulator of cytokinin signaling. Expression is down-regulated by cytokinins. There are two alternatively spliced genes for this locus, AHP6a and AHP6b, differing in the length of the first exon. In ahp6-2 seedlings, only the AHP6a transcript is present. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).
Computational
Description (TAIR10)
histidine phosphotransfer protein 6 (HP6); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:29568eggNOG:COG2198eggNOG:KOG4747EMBL:AC009322EMBL:CP002684EMBL:DQ093643EnsemblPlants:AT1G80100
EnsemblPlants:AT1G80100.1entrez:844350ExpressionAtlas:Q9SSC9Gene3D:1.20.120.160GeneID:844350Genevisible:Q9SSC9GO:GO:0000160
GO:GO:0004871GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0009735GO:GO:0009736GO:GO:0010089
GO:GO:0043424hmmpanther:PTHR28242hmmpanther:PTHR28242:SF1HOGENOM:HOG000272680InParanoid:Q9SSC9InterPro:IPR008207OMA:SLFHQGV
PaxDb:Q9SSC9Pfam:PF01627Pfam:Q9SSC9Pfscan:PS50894PhylomeDB:Q9SSC9PIR:E96832PRO:PR:Q9SSC9
PROSITE:PS50894ProteinModelPortal:Q9SSC9Proteomes:UP000006548RefSeq:NP_178127.2SMR:Q9SSC9STRING:3702.AT1G80100.1SUPFAM:SSF47226
TAIR:AT1G80100tair10-symbols:AHP6tair10-symbols:HP6UniGene:At.52576UniProt:Q9SSC9
Coordinates (TAIR10) chr1:+:30133818..30134652
Molecular Weight (calculated) 17855.60 Da
IEP (calculated) 6.68
GRAVY (calculated) -0.20
Length 154 amino acids
Sequence (TAIR10)
(BLAST)
001: MLGLGVDRLQ ADINRLLASL FHQGVLDEQF LQLQQLQDET SPNFVYDVIN IYFDESEKLL RNLRLLLMDR EFSDYKKIGL HLNQLVGSSS SIGARRVRNV
101: CVAFRSASEL SNRPGCLRGL EVVEHEYHYL KNMMHELFQL EQQRILAAGV RYPM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)