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AT1G79600.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:23851315 (2013): plastid
  • PMID:22274653 (2012): plastid plastid stroma plastoglobules
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16461379 (2006): plastid plastid stroma plastoglobules
  • PMID:16414959 (2006): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast, plastoglobule; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G71810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2753-MONOMEREC:2.7.-.-eggNOG:COG0661eggNOG:KOG1235EMBL:AC010793EMBL:AY039869EMBL:AY064971
EMBL:AY141992EMBL:CP002684EnsemblPlants:AT1G79600EnsemblPlants:AT1G79600.1entrez:844298GeneID:844298Genevisible:Q9MA15
GO:GO:0004672GO:GO:0005524GO:GO:0009507GO:GO:0010287GO:GO:0050821GO:GO:1902171hmmpanther:PTHR10566
hmmpanther:PTHR10566:SF85HOGENOM:HOG000232962InParanoid:Q9MA15InterPro:IPR000719InterPro:IPR004147InterPro:IPR011009InterPro:IPR016024
KEGG:ath:AT1G79600KO:K08869OMA:QMIELRDPaxDb:Q9MA15Pfam:PF03109Pfam:Q9MA15Pfscan:PS50011
PhylomeDB:Q9MA15PRIDE:Q9MA15PRO:PR:Q9MA15PROSITE:PS50011ProteinModelPortal:Q9MA15Proteomes:UP000006548RefSeq:NP_565214.1
SMR:Q9MA15STRING:3702.AT1G79600.1SUPFAM:SSF48371SUPFAM:SSF56112TAIR:AT1G79600UniGene:At.14753UniProt:Q9MA15
Coordinates (TAIR10) chr1:-:29950105..29952516
Molecular Weight (calculated) 79026.30 Da
IEP (calculated) 6.71
GRAVY (calculated) -0.08
Length 711 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLVVGQSLG LTLVGDGLSL RNSKINVGKS KFFSVNRRRL ARAALVQARP KEDGAAASPS PSSRPASVVQ YRRADLADDL QAEARALGRA IDASIYSPEL
101: IARKHGSQPF KALRRSLEIL GALGGFALKL GIDQKQGNLE KNMKKRAIEL RRIFTRLGPT FVKLGQGLST RPDLCPPDYL EELAELQDAL PTFPDAEAFA
201: CIERELDLSL ETIFSSVSPE PIAAASLGQV YKAQLRYSGQ VVAVKVQRPG IEEAIGLDFY LIRGVGKLIN KYVDFITTDV LTLIDEFACR VYQELNYVQE
301: AQNARRFKKL YADKADVLVP DIFWDYTSRK VLTMEWVEGT KLNEQLAIES QGLKVLDLVN TGIQCSLRQL LEYGFFHADP HPGNLLATPD GKLAFLDFGM
401: MSETPEEARF AIIGHVVHLV NRDYEAMARD YYALKFLSPD VDVTPIIPAL RDFFDDALNY TVSELNFKTL VDGLGAVFYQ YPFNVPPYYA LILRSLTVLE
501: GLALYADPNF KVLAASYPYF AKRLLTDPNP YLRDALIELL FKDGKFRWNR LENLLQQGSK DRDFSAKDAL QPVLKLLLDP NGEELRLLVI KEAVRVSEAI
601: ALGTVVDTYN SLPEFLRSLV FNGNGNGPLT MSTAELQSTL ELRDQVSRIW GLLQSSESFD PAILQPILQV LQQPEARRLG GRVAGGVGQR LAARFLQQLL
701: RATTPSSAPS P
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)