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AT1G79510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Uncharacterized conserved protein (DUF2358)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT1G16320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IFDReggNOG:ENOG41120V4EMBL:AC007202EMBL:AF348584
EMBL:AF370304EMBL:AY063091EMBL:AY086169EMBL:CP002684
EnsemblPlants:AT1G79510EnsemblPlants:AT1G79510.1EnsemblPlants:AT1G79510.2entrez:844289
GeneID:844289Gramene:AT1G79510.1Gramene:AT1G79510.2hmmpanther:PTHR22750
hmmpanther:PTHR22750:SF44HOGENOM:HOG000241022InterPro:IPR018790InterPro:IPR032710
KEGG:ath:AT1G79510OMA:YSSSWIEPfam:PF10184PhylomeDB:Q9SAJ8
PIR:D96826Proteomes:UP000006548RefSeq:NP_565211.1RefSeq:NP_974177.1
STRING:3702.AT1G79510.1SUPFAM:SSF54427TAIR:AT1G79510UniGene:At.19978
UniGene:At.75121UniProt:Q9SAJ8
Coordinates (TAIR10) chr1:-:29908271..29909175
Molecular Weight (calculated) 31450.50 Da
IEP (calculated) 7.06
GRAVY (calculated) -0.35
Length 275 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFLLPNLSP SFLLPTGKSL KEKPISNQAL SSSSSSSNSY EFEEDSLSPL SLFSVQAPPP VRGAQVKTKP SAQDKYQHGS KDDFYINLGL AVRTLREDLP
101: LLFTKDLNYD IYRDDITLVD PMNTFSGIDN YKLIFWALRF HGKILFRDIS LEIFRVWQPS ENMILIRWNL KGVPRVPWEA KGEFQGTSRY KLDRNGKIYE
201: HKVDNLAFNF PHQLKPATSV LDMVTACPAS PNPTFMFGAM DSYSSSWIEF YKAVQRTLDK QEEQMLVQDH FVPCS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)