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AT1G79370.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.971
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 79, subfamily C, polypeptide 1
Curator
Summary (TAIR10)
member of CYP79C
Computational
Description (TAIR10)
cytochrome P450, family 79, subfamily C, polypeptide 1 (CYP79C1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome p450 79c2 (TAIR:AT1G58260.1); Has 27664 Blast hits to 27484 proteins in 1529 species: Archae - 45; Bacteria - 2601; Metazoa - 10490; Fungi - 5132; Plants - 8509; Viruses - 0; Other Eukaryotes - 887 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2124eggNOG:KOG0156EMBL:CP002684EnsemblPlants:AT1G79370EnsemblPlants:AT1G79370.1entrez:844275Gene3D:1.10.630.10
GeneID:844275GO:GO:0005506GO:GO:0009684GO:GO:0016020GO:GO:0016021GO:GO:0016709GO:GO:0019761
GO:GO:0020037GO:GO:0098542Gramene:AT1G79370.1gramene_plant_reactome:1119486gramene_plant_reactome:6875991hmmpanther:PTHR24298hmmpanther:PTHR24298:SF1
InParanoid:F4IF38InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT1G79370ncoils:CoilOMA:KENLFMA
PaxDb:F4IF38Pfam:PF00067PRIDE:F4IF38PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086ProteinModelPortal:F4IF38
Proteomes:UP000006548RefSeq:NP_178055.2scanprosite:PS00086SMR:F4IF38STRING:3702.AT1G79370.1SUPFAM:SSF48264TAIR:AT1G79370
tair10-symbols:CYP79C1TMHMM:TMhelixUniGene:At.52569UniProt:F4IF38
Coordinates (TAIR10) chr1:+:29857934..29860163
Molecular Weight (calculated) 62391.00 Da
IEP (calculated) 8.02
GRAVY (calculated) -0.17
Length 546 amino acids
Sequence (TAIR10)
(BLAST)
001: MDYYLNNVIF SVVVTFSITL NIVFLIKSVV ARFLGRRKKL PPCPRGFPII GNLVGMLKNR PTSKWIVRVM NDMKTDIACF RFGRVHVIVI TSDVIAREVV
101: REKDAVFADR PDSYSAEYIS GGYNGVVFDE YGERQMKMKK VMSSELMSTK ALNLLLKVRN LESDNLLAYV HNLYNKDESK TKHGAVVNVR DIVCTHTHNV
201: KMRLLFGRRH FKETTMDGSL GLMEKEHFDA IFAALDCFFS FYVADYYPFL RGWNLQGEEA ELREAVDVIA RYNKMIIDEK IELWRGQNKD YNRAETKNDV
301: PMIKDWLDIL FTLKDENGKP LLTPQEITHL SVDLDVVGID NAVNVIEWTL AEMLNQREIL EKAVEEIDMV VGKERLVQES DVPNLNYVKA CCRETLRLHP
401: TNPFLVPHMA RHDTTLAGYF IPKGSHILVS RPGVGRNPKT WDEPLIYRPE RHITGNEVVL TEPDLRLVSF GTGRRGCVGA KLGTSMIVTL LGRLLQGFDW
501: TIPPGTTDRV ELVESKENLF MANPLMACVK PRLDPNMYPK LWTGPA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)