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AT1G79130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : SAUR-like auxin-responsive protein family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT1G16510.1); Has 1191 Blast hits to 1188 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J30AeggNOG:ENOG410YUJ0EMBL:AC002986EMBL:BT024795
EMBL:CP002684EnsemblPlants:AT1G79130EnsemblPlants:AT1G79130.1entrez:844254
GeneID:844254GO:GO:0005737GO:GO:0007275GO:GO:0009734
GO:GO:0040008Gramene:AT1G79130.1hmmpanther:PTHR31374hmmpanther:PTHR31374:SF37
HOGENOM:HOG000238628InParanoid:O64538IntAct:O64538InterPro:IPR003676
KEGG:ath:AT1G79130KO:K14488OMA:NVFVFEQPaxDb:O64538
Pfam:O64538Pfam:PF02519PhylomeDB:O64538PIR:T01042
PRO:PR:O64538Proteomes:UP000006548RefSeq:NP_178034.1STRING:3702.AT1G79130.1
TAIR:AT1G79130UniGene:At.50048UniProt:O64538
Coordinates (TAIR10) chr1:+:29771319..29771723
Molecular Weight (calculated) 14601.20 Da
IEP (calculated) 6.67
GRAVY (calculated) -0.14
Length 134 amino acids
Sequence (TAIR10)
(BLAST)
001: MKPLIRRLSR IADSSSCNRN RSGDIHHPTS TYSSSVFLVK RATVASSVPS GHVPVNVGED KERFVVSAEL LNHPVFVGLL NRSAQEYGYT QKGVLHIPCN
101: VFVFEQVVES LRSGIADDTS ELIASLSGED VSTE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)