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AT1G78530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.709
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G31420.2); Has 119357 Blast hits to 118005 proteins in 4373 species: Archae - 119; Bacteria - 14010; Metazoa - 43545; Fungi - 10336; Plants - 33459; Viruses - 443; Other Eukaryotes - 17445 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G78530-MONOMEREC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AC007260EMBL:AK226294EMBL:CP002684
EnsemblPlants:AT1G78530EnsemblPlants:AT1G78530.1entrez:844189GeneID:844189Genevisible:Q9SYM9GO:GO:0004674GO:GO:0005524
GO:GO:0005886GO:GO:0016021Gramene:AT1G78530.1hmmpanther:PTHR27000hmmpanther:PTHR27000:SF101HOGENOM:HOG000116550InParanoid:Q9SYM9
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT1G78530OMA:FLLYKKWPaxDb:Q9SYM9
Pfam:PF00069Pfam:Q9SYM9Pfscan:PS50011PhylomeDB:Q9SYM9PIR:G96813PRIDE:Q9SYM9PRO:PR:Q9SYM9
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q9SYM9Proteomes:UP000006548RefSeq:NP_177974.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9SYM9STRING:3702.AT1G78530.1SUPFAM:SSF56112TAIR:AT1G78530TMHMM:TMhelix
UniGene:At.52558UniProt:Q9SYM9
Coordinates (TAIR10) chr1:-:29539274..29540681
Molecular Weight (calculated) 40228.70 Da
IEP (calculated) 9.13
GRAVY (calculated) -0.17
Length 355 amino acids
Sequence (TAIR10)
(BLAST)
001: MANAKETTFY ITISVVAFVI GKIVIALLFY KRWKRKHTIH ENGFPVKGGG KMVMFRSQLL NSVSSDMFMK KTHKLSNKDI LGSGGFGTVY RLVIDDSTTF
101: AVKRLNRGTS ERDRGFHREL EAMADIKHRN IVTLHGYFTS PHYNLLIYEL MPNGSLDSFL HGRKALDWAS RYRIAVGAAR GISYLHHDCI PHIIHRDIKS
201: SNILLDHNME ARVSDFGLAT LMEPDKTHVS TFVAGTFGYL APEYFDTGKA TMKGDVYSFG VVLLELLTGR KPTDDEFFEE GTKLVTWVKG VVRDQREEVV
301: IDNRLRGSSV QENEEMNDVF GIAMMCLEPE PAIRPAMTEV VKLLEYIKLS TRSSF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)