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AT1G77920.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : bZIP transcription factor family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
bZIP transcription factor family protein; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGA1A-related gene 3 (TAIR:AT1G22070.1); Has 1009 Blast hits to 1009 proteins in 97 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 28; Plants - 845; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKSNeggNOG:ENOG410YEGWEMBL:AK228861EnsemblPlants:AT1G77920EnsemblPlants:AT1G77920.1entrez:844127ExpressionAtlas:Q0WQ44
GeneID:844127GO:GO:0003700GO:GO:0006351GO:GO:0043565Gramene:AT1G77920.1hmmpanther:PTHR22952hmmpanther:PTHR22952:SF203
InterPro:IPR004827InterPro:IPR025422KEGG:ath:AT1G77920KO:K14431ncoils:CoilOMA:STVMEADPaxDb:Q0WQ44
Pfam:PF00170Pfam:PF14144Pfam:Q93ZE2Pfscan:PS50217PhylomeDB:Q0WQ44PRIDE:Q0WQ44PROSITE:PS00036
PROSITE:PS50217ProteinModelPortal:Q0WQ44ProteinModelPortal:Q93ZE2RefSeq:NP_565162.1scanprosite:PS00036SMART:SM00338SMR:Q0WQ44
STRING:3702.AT1G77920.1SUPFAM:SSF57959TAIR:AT1G77920UniGene:At.16522UniProt:Q0WQ44UniProt:Q93ZE2
Coordinates (TAIR10) chr1:+:29298959..29300607
Molecular Weight (calculated) 41915.50 Da
IEP (calculated) 6.38
GRAVY (calculated) -0.60
Length 368 amino acids
Sequence (TAIR10)
(BLAST)
001: MMSSSSPTQL ASLRDMGIYE PFQQIVGWGN VFKSDINDHS PNTATSSIIQ VDPRIDDHNN NIKINYDSSH NQIEAEQPSS NDNQDDDGRI HDKMKRRLAQ
101: NREAARKSRL RKKAYVQQLE ESRLKLSQLE QELEKVKQQG HLGPSGSINT GIASFEMEYS HWLQEQSRRV SELRTALQSH ISDIELKMLV ESCLNHYANL
201: FQMKSDAAKA DVFYLISGMW RTSTERFFQW IGGFRPSELL NVVMPYLQPL TDQQILEVRN LQQSSQQAED ALSQGIDKLQ QSLAESIVID AVIESTHYPT
301: HMAAAIENLQ ALEGFVNQAD HLRQQTLQQM AKILTTRQSA RGLLALGEYL HRLRALSSLW AARPQEPT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)