AT1G77580.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF869) | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G21810.1); Has 179109 Blast hits to 86523 proteins in 3458 species: Archae - 2679; Bacteria - 35310; Metazoa - 76898; Fungi - 14876; Plants - 11116; Viruses - 700; Other Eukaryotes - 37530 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29144632..29146600 | ||||||||
| Molecular Weight (calculated) | 71589.10 Da | ||||||||
| IEP (calculated) | 4.38 | ||||||||
| GRAVY (calculated) | -0.74 | ||||||||
| Length | 629 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MESRDDEIQS PTVSLEVETE KEELKDSMKT LAEKLSAALA NVSAKDDLVK QHVKVAEEAV AGWEKAENEV VELKEKLEAA DDKNRVLEDR VSHLDGALKE 101: CVRQLRQARD EQEQRIQDAV IERTQELQSS RTSLENQIFE TATKSEELSQ MAESVAKENV MLRHELLARC EELEIRTIER DLSTQAAETA SKQQLDSIKK 201: VAKLEAECRK FRMLAKSSAS FNDHRSTDSH SDGGERMDVS CSDSWASSTL IEKRSLQGTS SSIELDLMGD FLEMERLVAL PETPDGNGKS GPESVTEEVV 301: VPSENSLASE IEVLTSRIKE LEEKLEKLEA EKHELENEVK CNREEAVVHI ENSEVLTSRT KELEEKLEKL EAEKEELKSE VKCNREKAVV HVENSLAAEI 401: EVLTSRTKEL EEQLEKLEAE KVELESEVKC NREEAVAQVE NSLATEIEVL TCRIKQLEEK LEKLEVEKDE LKSEVKCNRE VESTLRFELE AIACEKMELE 501: NKLEKLEVEK AELQISFDII KDKYEESQVC LQEIETKLGE IQTEMKLVNE LKAEVESQTI AMEADAKTKS AKIESLEEDM RKERFAFDEL RRKCEALEEE 601: ISLHKENSIK SENKEPKIKQ VCLQSSGVS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)