AT1G77500.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF630 and DUF632) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G21740.1); Has 982 Blast hits to 757 proteins in 139 species: Archae - 0; Bacteria - 60; Metazoa - 125; Fungi - 47; Plants - 679; Viruses - 3; Other Eukaryotes - 68 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:29121753..29124937 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 98627.50 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.07 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.71 | ||||||||||||||||||||||||||||
| Length | 879 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCGGSKVDN QPIVILCRER KELLKAASYH RSALAVAHLT YFQSLSDVGE AIQRFVDDEV VAGFSSSSSP DSPVLTLPSD EGKPTKHKRI SPSSTTSISH 101: SVIEEEDTDD DSHLHLSSGS ESESEVGSKD HIQITSTPEQ ERSTESFPSG YHPTNYAPPV YPPGYPPGYP FSYPTGYSSG NYQPGYPNYT GENPYGNRGM 201: YYMKKSAPQS RPFIFQPENH RVEENAQWPS DSGFRNTGVQ RRSPSPLPPP SPPTVSTWDF LNVFDTYDYS NARSRASGYY PMGMASISSS PDSKEVRERE 301: GIPELEEVTE QEVIKQVYRR PKRPGLEKVK EHRDEHKHNV FPERNINKRE VPMPEQVTES SLDSETISSF SGSDVESEFH YVNGGEGKSS SISSISHGAG 401: TKSSREVEEQ YGRKKGVSFE LEETTSTSSF DVESSKISSL SSLSIHATRD LREVVKEIKS EFEIASSCGK EVALLLEVGK LPYQHKNNGV KVILSRIMYL 501: VAPSTRSSHS QPRLSIRLTS RTRKMAKSYN GQDVNGGFNG NLSSTLEKLY AWEKKLYKEV KDEEKLRAIY EEKCRRLKKM DSHGAESIKI DATRAAIRKL 601: LTKIDVCIRS VDSISSRIHK LRDEELQPQL IQLIHGLIRM WRSMLRCHQK QFQAIRESKV RSLKANTTLQ NDSGSTAILD LEIELREWCI SFNNWVNTQK 701: SYVQFLSGWL TKCLHYEPEA TDDGIAPFSP SQIGAPPIFI ICKDWQEAMC RISGENVTNA MQGFASSLHE LWEKQEEEQR VKAQSEQRDA ESERSVVSKG 801: RSESGISALD DLKVDLDSMR KRLVEERGKG KETIKLVNNA SSSSLKAGLV PIFGALRKFT SEVVKAHEIV RLQHPQTSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)