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AT1G77020.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.949
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock N-terminal domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G76700.1); Has 22982 Blast hits to 22863 proteins in 3207 species: Archae - 174; Bacteria - 9243; Metazoa - 3904; Fungi - 2258; Plants - 2332; Viruses - 18; Other Eukaryotes - 5053 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2214eggNOG:KOG0691EMBL:CP002684EnsemblPlants:AT1G77020EnsemblPlants:AT1G77020.1entrez:844038Gene3D:1.10.287.110
GeneID:844038Gramene:AT1G77020.1hmmpanther:PTHR24078hmmpanther:PTHR24078:SF219InParanoid:F4I5J7InterPro:IPR001623InterPro:IPR018253
InterPro:IPR026894KEGG:ath:AT1G77020ncoils:CoilOMA:ASDKFQAPaxDb:F4I5J7Pfam:PF00226Pfam:PF14308
Pfscan:PS50076PRIDE:F4I5J7PRINTS:PR00625PROSITE:PS00636PROSITE:PS50076ProteinModelPortal:F4I5J7Proteomes:UP000006548
RefSeq:NP_177828.2scanprosite:PS00636SMART:SM00271SMR:F4I5J7STRING:3702.AT1G77020.1SUPFAM:SSF46565TAIR:AT1G77020
UniGene:At.34560UniProt:F4I5J7
Coordinates (TAIR10) chr1:-:28945056..28946867
Molecular Weight (calculated) 42828.40 Da
IEP (calculated) 5.25
GRAVY (calculated) -0.60
Length 379 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKETVYYDV LGVTPSASEE EIRKAYYIKA RQVHPDKNQG DPLAAEKFQV LGEAYQVLSD PVHREAYDRT GKFSAPKETM VDPTAVFALL FGSELFEDYI
101: GHLAVASMAS TQMASEIENS DQFQDKLKAV QKEREENLSR FLKDFLSQYV HGDKEGFISR AESEAKRLSD AAFGADMLHT IGYVYTRQAA QELGKRALYL
201: GVPFVAEWVR NKGHSWKSQI SAAKGALQLL QLQEESNRRL KKDGTSPANE LESHIQTNKE TLMGSLWKLN VVDIEVTLLH VCQMVFRENN LRKEELKSRA
301: MALKILGKIF QQEKQSKNGT TSRKEDEDSD DDDSSSDDDS SQPLSYRTPL LTQGIGRLFR CLCNPAFDVD DDEIVYKGK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)