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AT1G76680.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : 12-oxophytodienoate reductase 1
Curator
Summary (TAIR10)
Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein.
Computational
Description (TAIR10)
12-oxophytodienoate reductase 1 (OPR1); FUNCTIONS IN: 12-oxophytodienoate reductase activity; INVOLVED IN: in 7 processes; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: seedling growth, developing seed stage; CONTAINS InterPro DOMAIN/s: NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155), Aldolase-type TIM barrel (InterPro:IPR013785); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 2 (TAIR:AT1G76690.1); Has 13181 Blast hits to 13160 proteins in 2055 species: Archae - 127; Bacteria - 9806; Metazoa - 29; Fungi - 862; Plants - 449; Viruses - 0; Other Eukaryotes - 1908 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G76680-MONOMERBioCyc:ARA:GQT-2508-MONOMERBRENDA:1.3.1.42EC:1.3.1.42
EMBL:AC010718EMBL:AY074874EMBL:AY087801EMBL:BT020365
EMBL:CP002684EMBL:U92460EMBL:Y10617EnsemblPlants:AT1G76680
EnsemblPlants:AT1G76680.1entrez:844001EvolutionaryTrace:Q8LAH7ExpressionAtlas:Q8LAH7
Gene3D:3.20.20.70GeneID:844001Genevisible:Q8LAH7GO:GO:0005737
GO:GO:0010181GO:GO:0016629GO:GO:0031408gramene_pathway:1.3.1.42
gramene_pathway:PWY-735hmmpanther:PTHR22893hmmpanther:PTHR22893:SF44HOGENOM:HOG000116231
InParanoid:Q8LAH7IntAct:Q8LAH7InterPro:IPR001155InterPro:IPR013785
KEGG:ath:AT1G76680KO:K05894PDB:1VJIPDB:2Q3R
PDBsum:1VJIPDBsum:2Q3RPfam:PF00724Pfam:Q8LAH7
PhylomeDB:Q8LAH7PIR:B96795PRIDE:Q8LAH7PRO:PR:Q8LAH7
ProteinModelPortal:Q8LAH7Proteomes:UP000006548RefSeq:NP_177794.1SMR:Q8LAH7
SUPFAM:SSF51395TAIR:AT1G76680tair10-symbols:ATOPR1tair10-symbols:OPR1
UniGene:At.11155UniGene:At.67448UniGene:At.73001UniPathway:UPA00382
UniProt:Q8LAH7
Coordinates (TAIR10) chr1:+:28776982..28778271
Molecular Weight (calculated) 41170.00 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.36
Length 372 amino acids
Sequence (TAIR10)
(BLAST)
001: MENGEAKQSV PLLTPYKMGR FNLSHRVVLA PLTRQRSYGN VPQPHAAIYY SQRTTPGGFL ITEATGVSDT AQGYQDTPGI WTKEHVEAWK PIVDAVHAKG
101: GIFFCQIWHV GRVSNSGFQP NGKAPISCSD KPLMPQIRSN GIDEALFTPP RRLGIEEIPG IVNDFRLAAR NAMEAGFDGV EIHGANGYLI DQFMKDTVND
201: RTDEYGGSLQ NRCKFPLEIV DAVAKEIGPD RVGIRLSPFA DYMESGDTNP GALGLYMAES LNKYGILYCH VIEARMKTMG EVHACPHTLM PMRKAFKGTF
301: ISAGGFTRED GNEAVSKGRT DLVAYGRWFL ANPDLPKRFQ VDAPLNKYDR PTFYTSDPVV GYTDYPFLES TA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)