suba logo
AT1G76370.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G20650.1); Has 116740 Blast hits to 115327 proteins in 4249 species: Archae - 89; Bacteria - 13267; Metazoa - 43525; Fungi - 9932; Plants - 32974; Viruses - 403; Other Eukaryotes - 16550 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G76370-MONOMEReggNOG:COG0515eggNOG:KOG1187EMBL:AC012394EMBL:CP002684EnsemblPlants:AT1G76370EnsemblPlants:AT1G76370.1
entrez:843969Gene3D:2.60.120.200GeneID:843969GO:GO:0004674GO:GO:0005524GO:GO:0009941Gramene:AT1G76370.1
hmmpanther:PTHR27001hmmpanther:PTHR27001:SF3HOGENOM:HOG000116550InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441KEGG:ath:AT1G76370OMA:YLHCKISPfam:PF00069Pfscan:PS50011PhylomeDB:Q9SFX0PIR:C96791
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011Proteomes:UP000006548Reactome:R-ATH-450302Reactome:R-ATH-450321RefSeq:NP_177763.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9SFX0STRING:3702.AT1G76370.1SUPFAM:SSF56112TAIR:AT1G76370
UniGene:At.34667UniProt:Q9SFX0
Coordinates (TAIR10) chr1:-:28648660..28650239
Molecular Weight (calculated) 42320.00 Da
IEP (calculated) 9.49
GRAVY (calculated) -0.28
Length 381 amino acids
Sequence (TAIR10)
(BLAST)
001: MRCFSCLNTQ TNDMRINIDT LSDLTDYASV ATKIDPRGTG SKSGILVNGK VNSPKPGGGA RSFTFKELAA ATKNFREGNI IGKGGFGSVY KGRLDSGQVV
101: AIKQLNPDGH QGNQEFIVEV CMLSVFHHPN LVTLIGYCTS GAQRLLVYEY MPMGSLEDHL FDLEPDQTPL SWYTRMKIAV GAARGIEYLH CKISPSVIYR
201: DLKSANILLD KEFSVKLSDF GLAKVGPVGN RTHVSTRVMG TYGYCAPEYA MSGRLTIKSD IYSFGVVLLE LISGRKAIDL SKPNGEQYLV AWARPYLKDP
301: KKFGLLVDPL LRGKFSKRCL NYAISITEMC LNDEANHRPK IGDVVVAFEY IASQSKSYED RRTARKSTDS NRLRRETKQS Y
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)