AT1G76370.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast envelope; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G20650.1); Has 116740 Blast hits to 115327 proteins in 4249 species: Archae - 89; Bacteria - 13267; Metazoa - 43525; Fungi - 9932; Plants - 32974; Viruses - 403; Other Eukaryotes - 16550 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:28648660..28650239 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42320.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.49 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 381 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRCFSCLNTQ TNDMRINIDT LSDLTDYASV ATKIDPRGTG SKSGILVNGK VNSPKPGGGA RSFTFKELAA ATKNFREGNI IGKGGFGSVY KGRLDSGQVV 101: AIKQLNPDGH QGNQEFIVEV CMLSVFHHPN LVTLIGYCTS GAQRLLVYEY MPMGSLEDHL FDLEPDQTPL SWYTRMKIAV GAARGIEYLH CKISPSVIYR 201: DLKSANILLD KEFSVKLSDF GLAKVGPVGN RTHVSTRVMG TYGYCAPEYA MSGRLTIKSD IYSFGVVLLE LISGRKAIDL SKPNGEQYLV AWARPYLKDP 301: KKFGLLVDPL LRGKFSKRCL NYAISITEMC LNDEANHRPK IGDVVVAFEY IASQSKSYED RRTARKSTDS NRLRRETKQS Y |
||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)