AT1G76220.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Arabidopsis protein of unknown function (DUF241) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35690.1); Has 446 Blast hits to 436 proteins in 35 species: Archae - 3; Bacteria - 10; Metazoa - 14; Fungi - 2; Plants - 400; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28597530..28598300 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 29905.30 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.09 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.59 | ||||||||||||||||||||||||
| Length | 256 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MACTSSSGAH VRSTSWSEDV NPLSRAIEDH LLLLKKRPES ARRKLGVLKN LYEVVEVFLR FQTTKTQKSF TGFEDVSDGF IEVLDICSTI RDVLMEIKEQ 101: VRELESSLRR RLIRSKSGED QEAFVARETD AYVFKRRALS RTIVKQLKKT EEKMRKRKRD CGDVINVMKR VEKTSFDVLV SLLIEVVTKD QRDQKKGSRR 201: GIVSRIFNKK NQEVDVDELK KLRETEHEIE ETEKELECVY KKLLKTRVSF LNMLTL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)