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AT1G76185.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.960
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20460.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AK220990EMBL:AY086332EMBL:BT024752EMBL:CP002684
EnsemblPlants:AT1G76185EnsemblPlants:AT1G76185.1entrez:843951GeneID:843951
GO:GO:0016021Gramene:AT1G76185.1hmmpanther:PTHR34936hmmpanther:PTHR34936:SF1
HOGENOM:HOG000005691KEGG:ath:AT1G76185OMA:FMIWELIPhylomeDB:Q8LCY3
Proteomes:UP000006548RefSeq:NP_565127.1TAIR:AT1G76185TMHMM:TMhelix
UniGene:At.34694UniProt:Q8LCY3
Coordinates (TAIR10) chr1:+:28590497..28591157
Molecular Weight (calculated) 12425.80 Da
IEP (calculated) 11.54
GRAVY (calculated) 0.51
Length 106 amino acids
Sequence (TAIR10)
(BLAST)
001: MITRSNLAEQ LREYQIRSKH DWASVSFFSS TSNFSSSRVD VVVFVIWELV MLALVVFSAV SLYFRRLQLA FILLCVTLLL LLCMKITKQV RHARKKKRRM
101: LLPLSM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)