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AT1G76040.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23990937 (2013): plasma membrane
  • PMID:22923678 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16618929 (2006): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : calcium-dependent protein kinase 29
Curator
Summary (TAIR10)
member of Calcium Dependent Protein Kinase
Computational
Description (TAIR10)
calcium-dependent protein kinase 29 (CPK29); FUNCTIONS IN: calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleus, plasma membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 15 (TAIR:AT4G21940.2); Has 71074 Blast hits to 61991 proteins in 2513 species: Archae - 15; Bacteria - 1854; Metazoa - 30398; Fungi - 13026; Plants - 12160; Viruses - 42; Other Eukaryotes - 13579 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT1G76040EnsemblPlants:AT1G76040.1entrez:843936hmmpanther:PTHR24349hmmpanther:PTHR24349:SF89Pfam:PF00069Pfam:PF13499
Pfscan:PS50011Pfscan:PS50222scanprosite:PS00018tair10-symbols:CPK29
Coordinates (TAIR10) chr1:+:28538906..28540448
Molecular Weight (calculated) 37163.70 Da
IEP (calculated) 5.11
GRAVY (calculated) -0.36
Length 323 amino acids
Sequence (TAIR10)
(BLAST)
001: MFECILAKTL VLYFEIRTSN HLIWLIFVGK VYRDIVGSAY YVAPEVLHRN YGKEIDVWSA GVMLYILLSG VPPFWGETEK TIFEAILEGK LDLETSPWPT
101: ISESAKDLIR KMLIRDPKKR ITAAEALEHP WMTDTKISDK PINSAVLVRM KQFRAMNKLK KLALKVIAEN LSEEEIKGLK QTFKNMDTDE SGTITFDELR
201: NGLHRLGSKL TESEIKQLME AADVDKSGTI DYIEFVTATM HRHRLEKEEN LIEAFKYFDK DRSGFITRDE LKHSMTEYGM GDDATIDEVI NDVDTDNDGR
301: INYEEFVAMM RKGTTDSDPK LIR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)