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AT1G76030.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 0.500
vacuole 0.500
ASURE: golgi,vacuole
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : ATPase, V1 complex, subunit B protein
Curator
Summary (TAIR10)
Encodes the vacuolar ATP synthase subunit B1. This subunit was shown to interact with the gene product of hexokinase1 (ATHXK1). This interaction, however, is solely restricted to the nucleus.
Computational
Description (TAIR10)
ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism, ATP binding; INVOLVED IN: response to cadmium ion, glucose mediated signaling pathway; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G20260.1); Has 40608 Blast hits to 39489 proteins in 9699 species: Archae - 963; Bacteria - 21151; Metazoa - 1673; Fungi - 795; Plants - 8192; Viruses - 0; Other Eukaryotes - 7834 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G76030-MONOMERBioGrid:29153eggNOG:COG1156eggNOG:KOG1351EMBL:AC007396EMBL:AY094424EMBL:AY125532
EMBL:CP002684EMBL:J04185EMBL:Z29126EnsemblPlants:AT1G76030EnsemblPlants:AT1G76030.1entrez:843934Gene3D:3.40.50.300
GeneID:843934Genevisible:P11574GO:GO:0005524GO:GO:0005773GO:GO:0005774GO:GO:0005794GO:GO:0005886
GO:GO:0009506GO:GO:0009507GO:GO:0010255GO:GO:0015991GO:GO:0016020GO:GO:0016820GO:GO:0030835
GO:GO:0033180GO:GO:0046034GO:GO:0046686GO:GO:0051015GO:GO:0051017GO:GO:0051693Gramene:AT1G76030.1
HAMAP:MF_00310hmmpanther:PTHR15184hmmpanther:PTHR15184:SF53HOGENOM:HOG000165320InParanoid:P11574IntAct:P11574InterPro:IPR000194
InterPro:IPR004100InterPro:IPR005723InterPro:IPR020003InterPro:IPR022879InterPro:IPR027417iPTMnet:P11574KEGG:00190+3.6.3.14
KEGG:ath:AT1G76030KO:K02147OMA:IKPRINYPaxDb:P11574Pfam:P11574Pfam:PF00006Pfam:PF00306
Pfam:PF02874PhylomeDB:P11574PIR:A31886PIR:G96788PIRSF:PIRSF039114PRIDE:P11574PRO:PR:P11574
PROSITE:PS00152ProteinModelPortal:P11574Proteomes:UP000006548Reactome:R-ATH-77387Reactome:R-ATH-917977RefSeq:NP_177729.1scanprosite:PS00152
SMR:P11574STRING:3702.AT1G76030.1SUPFAM:SSF52540TAIR:AT1G76030TCDB:3.A.2.2.5TIGRfam:TIGR01040TIGRFAMs:TIGR01040
UniGene:At.21359UniGene:At.68155UniProt:P11574
Coordinates (TAIR10) chr1:+:28534134..28536916
Molecular Weight (calculated) 54110.80 Da
IEP (calculated) 4.73
GRAVY (calculated) -0.24
Length 486 amino acids
Sequence (TAIR10)
(BLAST)
001: MGTNDLDIEE GTLEIGMEYR TVSGVAGPLV ILDKVKGPKY QEIVNIRLGD GSTRRGQVLE VDGEKAVVQV FEGTSGIDNK FTTVQFTGEV LKTPVSLDML
101: GRIFNGSGKP IDNGPPILPE AYLDISGSSI NPSERTYPEE MIQTGISTID VMNSIARGQK IPLFSAAGLP HNEIAAQICR QAGLVKRLEK TVDLLEDHGE
201: DNFAIVFAAM GVNMETAQFF KRDFEENGSM ERVTLFLNLA NDPTIERIIT PRIALTTAEY LAYECGKHVL VILTDMSSYA DALREVSAAR EEVPGRRGYP
301: GYMYTDLATI YERAGRIEGR KGSITQIPIL TMPNDDITHP TPDLTGYITE GQIYIDRQLH NRQIYPPINV LPSLSRLMKS AIGEGMTRKD HSDVSNQLYA
401: NYAIGKDVQA MKAVVGEEAL SSEDLLYLEF LDKFERKFVM QGAYDTRNIF QSLDLAWTLL RIFPRELLHR IPAKTLDQFY SRDSTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)