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AT1G75880.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.986
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : SGNH hydrolase-type esterase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SGNH hydrolase-type esterase superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G75890.2); Has 3759 Blast hits to 3718 proteins in 343 species: Archae - 0; Bacteria - 575; Metazoa - 0; Fungi - 43; Plants - 3122; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G75880-MONOMERBioCyc:ARA:GQT-2032-MONOMERBioGrid:29140EC:3.1.1.-eggNOG:COG3240eggNOG:ENOG410JVBCEMBL:AC007396
EMBL:AY028609EMBL:BT004215EMBL:BT005026EMBL:CP002684EnsemblPlants:AT1G75880EnsemblPlants:AT1G75880.1entrez:843921
Gene3D:3.40.50.1110GeneID:843921Genevisible:Q94CH8GO:GO:0005576GO:GO:0016042GO:GO:0016298hmmpanther:PTHR22835
hmmpanther:PTHR22835:SF184HOGENOM:HOG000237650InParanoid:Q94CH8IntAct:Q94CH8InterPro:IPR001087InterPro:IPR008265InterPro:IPR013830
iPTMnet:Q94CH8KEGG:ath:AT1G75880OMA:MSSTCEDPaxDb:Q94CH8Pfam:PF00657Pfam:Q94CH8PhylomeDB:Q94CH8
PRIDE:Q94CH8PRO:PR:Q94CH8PROSITE:PS01098ProteinModelPortal:Q94CH8Proteomes:UP000006548RefSeq:NP_565120.1RefSeq:NP_974149.1
scanprosite:PS01098STRING:3702.AT1G75880.1SUPFAM:SSF52266TAIR:AT1G75880TMHMM:TMhelixUniGene:At.15392UniProt:Q94CH8
Coordinates (TAIR10) chr1:+:28490564..28492298
Molecular Weight (calculated) 41336.00 Da
IEP (calculated) 8.23
GRAVY (calculated) 0.14
Length 375 amino acids
Sequence (TAIR10)
(BLAST)
001: MERCRSGHHR IISYYLSSSL ILFWCIFVLV LLSTTSTTNA LVKIPKNTTV PAVIVFGDSI VDAGNNDDMI TEARCDYAPY GIDFDGGVAT GRFSNGKVPG
101: DIVAEELGIK PNIPAYRNPN LKPEELLTGV TFASGGAGYV PLTTKIAVGG IPLPQQLIYF EEYIEKLKQM VGEKRTKFII KNSLFVVICG SNDIANDFFT
201: LPPVRLHYTV ASFTALMADN ARSFAQTLYG YGARRILVFG APPIGCVPSQ RTVAGGPTRD CVARFNDAAK LFNTKLSANI DVLSRTLQDP TIIYIDIYSP
301: LLDLILNPHQ YGFKVANKGC CGTGLIEVTA LCNNYTASVC PIRSDYVFWD SFHPTEKAYR IIVAKLLDRY LNRFF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)