suba logo
AT1G75770.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 6 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JXCKeggNOG:ENOG411043AEMBL:AY049268EMBL:BT000843
EMBL:CP002684EnsemblPlants:AT1G75770EnsemblPlants:AT1G75770.1entrez:843910
GeneID:843910Gramene:AT1G75770.1HOGENOM:HOG000151172KEGG:ath:AT1G75770
OMA:RFISSYQProteomes:UP000006548RefSeq:NP_565117.1TAIR:AT1G75770
UniGene:At.15707UniProt:Q94A92
Coordinates (TAIR10) chr1:+:28450022..28450971
Molecular Weight (calculated) 26003.10 Da
IEP (calculated) 10.23
GRAVY (calculated) -0.64
Length 230 amino acids
Sequence (TAIR10)
(BLAST)
001: MSKKKKTQSL SMEDHRDGKG KKRDDFFDSI DYEISSILLQ LSHPVIFSSD SPVLHKWGRT KKRSSSSSHL HPPEPVIKSL PCMADVGDMG SNSSSSCLTG
101: EAKKTNSQII KKGLEEEFCR KNQSSSVLEA ETGLLREQAG LIAQPIRYDQ QLPFFAVDRT VNVRDVETAS LRMDNLERRG FDLNLLPAAE EGFQRVPNKV
201: QVAAQARQRR LGLIRSKKLF NRFISSYQFK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)