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AT1G75410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : BEL1-like homeodomain 3
Curator
Summary (TAIR10)
BEL1-like homeodomain 3 (BLH3)
Computational
Description (TAIR10)
BEL1-like homeodomain 3 (BLH3); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 10 (TAIR:AT1G19700.3); Has 5228 Blast hits to 5212 proteins in 344 species: Archae - 0; Bacteria - 24; Metazoa - 2027; Fungi - 328; Plants - 2469; Viruses - 0; Other Eukaryotes - 380 (source: NCBI BLink).
Protein Annotations
BioGrid:29096eggNOG:ENOG410XPMQeggNOG:KOG0773EMBL:AC023754EMBL:AF353093EMBL:AK226561EMBL:AY062545
EMBL:AY085278EMBL:AY598452EMBL:BT000133EMBL:CP002684EnsemblPlants:AT1G75410EnsemblPlants:AT1G75410.1EnsemblPlants:AT1G75410.2
entrez:843877Gene3D:1.10.10.60GeneID:843877Genevisible:Q9FWS9GO:GO:0003677GO:GO:0003700GO:GO:0005634
GO:GO:0006351GO:GO:0048510Gramene:AT1G75410.1Gramene:AT1G75410.2hmmpanther:PTHR11850hmmpanther:PTHR11850:SF111HOGENOM:HOG000239679
InParanoid:Q9FWS9IntAct:Q9FWS9InterPro:IPR001356InterPro:IPR006563InterPro:IPR008422InterPro:IPR009057KEGG:ath:AT1G75410
OMA:QESIYLNPaxDb:Q9FWS9Pfam:PF05920Pfam:PF07526Pfam:Q9FWS9Pfscan:PS50071PhylomeDB:Q9FWS9
PIR:F96784PRIDE:Q9FWS9PRO:PR:Q9FWS9PROSITE:PS00027PROSITE:PS50071ProteinModelPortal:Q9FWS9Proteomes:UP000006548
RefSeq:NP_001077827.1RefSeq:NP_177674.1SMART:SM00389SMART:SM00574SMR:Q9FWS9STRING:3702.AT1G75410.1SUPFAM:SSF46689
TAIR:AT1G75410tair10-symbols:BLH3UniGene:At.16254UniGene:At.74119UniProt:Q9FWS9
Coordinates (TAIR10) chr1:-:28300095..28301890
Molecular Weight (calculated) 59682.30 Da
IEP (calculated) 6.73
GRAVY (calculated) -0.87
Length 524 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVYYPNSVG MQSLYQESIY LNEQQQQQQQ ASSSSAASFS EIVSGDVRNN EMVFIPPTSD VAVNGNVTVS SNDLSFHGGG LSLSLGNQIQ SAVSVSPFQY
101: HYQNLSNQLS YNNLNPSTMS DENGKSLSVH QHHSDQILPS SVYNNNGNNG VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL LDEVVSVRKD LKLGNKKMKN
201: DKGQDFHNGS SDNITEDDKS QSQELSPSER QELQSKKSKL LTMVDEVDKR YNQYHHQMEA LASSFEMVTG LGAAKPYTSV ALNRISRHFR CLRDAIKEQI
301: QVIRGKLGER ETSDEQGERI PRLRYLDQRL RQQRALHQQL GMVRPAWRPQ RGLPENSVSI LRAWLFEHFL HPYPKESEKI MLSKQTGLSK NQVANWFINA
401: RVRLWKPMIE EMYKEEFGES AELLSNSNQD TKKMQETSQL KHEDSSSSQQ QNQGNNNNNI PYTSDAEQNL VFADPKPDRA TTGDYDSLMN YHGFGIDDYN
501: RYVGLGNQQD GRYSNPHQLH DFVV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)