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AT1G75300.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : NmrA-like negative transcriptional regulator family protein
Curator
Summary (TAIR10)
encodes a protein whose sequence is similar to an isoflavone reductase
Computational
Description (TAIR10)
NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1595 Blast hits to 1591 proteins in 336 species: Archae - 8; Bacteria - 421; Metazoa - 0; Fungi - 508; Plants - 551; Viruses - 7; Other Eukaryotes - 100 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G75300-MONOMEReggNOG:ENOG410J353eggNOG:ENOG41129ZGEMBL:AC025814
EMBL:AK117797EMBL:BT008345EMBL:CP002684EnsemblPlants:AT1G75300
EnsemblPlants:AT1G75300.1entrez:843867Gene3D:3.40.50.720GeneID:843867
Gramene:AT1G75300.1hmmpanther:PTHR10366hmmpanther:PTHR10366:SF441HOGENOM:HOG000237415
InterPro:IPR008030InterPro:IPR016040KEGG:ath:AT1G75300OMA:KSINHAV
Pfam:PF05368PhylomeDB:Q9FRM1PIR:E96783Proteomes:UP000006548
RefSeq:NP_177665.1SMR:Q9FRM1STRING:3702.AT1G75300.1SUPFAM:SSF51735
TAIR:AT1G75300UniGene:At.34791UniProt:Q9FRM1
Coordinates (TAIR10) chr1:+:28255552..28256927
Molecular Weight (calculated) 35620.90 Da
IEP (calculated) 6.53
GRAVY (calculated) -0.09
Length 322 amino acids
Sequence (TAIR10)
(BLAST)
001: MTTEKSKILV IGGTGYMGEF IVEGSAKAGN PTFALVREAS LSDPVKSKTI QSFKDLGVTI LHGDLNDHES LVKAIKQVDV VISTIGHKQI FDQTKIISAI
101: KEAGNVKRFL PAEFGIDVER TSAVEPAKSL FAGKVQIRRA IEAEGIPYTY VVSNCSAGFY LRTLLQFESG LISHTRDKAI IFGDKNVPPR DKVTILGDGN
201: AKVVINKEED VAAYMIKAVD DLRTLNKTLY ISPPNNILSM NEMVTLWEKK IGKSLEKTHI SEEQILKSIQ VPIDVFKSIN HAVFVKGDQT SFTIEPWFGE
301: EASVLYPDVK YTSIDEYLSQ FT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)