suba logo
AT1G75290.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
cytosol 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
encodes a protein whose sequence is similar to an isoflavone reductase
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sepal, male gametophyte, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2800 Blast hits to 2796 proteins in 694 species: Archae - 20; Bacteria - 1285; Metazoa - 16; Fungi - 637; Plants - 615; Viruses - 7; Other Eukaryotes - 220 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G75290-MONOMEReggNOG:ENOG410IIFGeggNOG:ENOG410Y0DYEMBL:BT033106EMBL:CP002684EnsemblPlants:AT1G75290EnsemblPlants:AT1G75290.1
entrez:843866Gene3D:3.40.50.720GeneID:843866Gramene:AT1G75290.1gramene_pathway:PWY-641hmmpanther:PTHR10366hmmpanther:PTHR10366:SF391
InterPro:IPR008030InterPro:IPR016040KEGG:ath:AT1G75290OMA:IDEYLSYPfam:PF05368PhylomeDB:B3LFB7Proteomes:UP000006548
RefSeq:NP_177664.4SMR:B3LFB7STRING:3702.AT1G75290.1SUPFAM:SSF51735TAIR:AT1G75290UniGene:At.52521UniProt:B3LFB7
Coordinates (TAIR10) chr1:+:28253890..28255173
Molecular Weight (calculated) 35049.00 Da
IEP (calculated) 6.07
GRAVY (calculated) -0.17
Length 318 amino acids
Sequence (TAIR10)
(BLAST)
001: MASEKSKILV IGGTGHIGKL IIEASVKAGH STLALVREAS LSDPNKGKTV QNFKDFGVTL LHGDLNDHES LVKAIKQADV VISTVGSMQI LDQTKIISAI
101: KEAGNVKRFL PSEFGMDVDK SSAVEPAKSA FGRKLQTRRD IEAEGIPYTY LVTNYFAGYY LPTLVQLEPG LTSPPRDKVK IFGDGNVKAV INKEEDIAAY
201: TIKAVDDPRT LNKTLYINPP NNTLSMNEIV TLWEKKIGKS VEKIYMSEEQ IFKSIQESPV PFNVLLSINH AVFVKGDQTN FTIEPSFGFE ASELYPDIKY
301: TSIDEYLSYF ALGTSLNT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)