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AT1G75250.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : RAD-like 6
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
RAD-like 6 (RL6); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: RAD-like 5 (TAIR:AT1G19510.1); Has 590 Blast hits to 589 proteins in 66 species: Archae - 0; Bacteria - 0; Metazoa - 121; Fungi - 0; Plants - 466; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT1G75250EnsemblPlants:AT1G75250.1entrez:843862hmmpanther:PTHR24078hmmpanther:PTHR24078:SF177tair10-symbols:ATRL6tair10-symbols:RL6
tair10-symbols:RSM3
Coordinates (TAIR10) chr1:-:28245073..28245453
Molecular Weight (calculated) 14749.40 Da
IEP (calculated) 7.74
GRAVY (calculated) -0.47
Length 126 amino acids
Sequence (TAIR10)
(BLAST)
001: MASNSRSSIS PWTFSQNKMF ERALAVYDKD TPDRWHNVAK AVGGKTVEEV KRHYDILVED LINIETGRVP LPNYKTFESN SRSINDFDTR YITKYLYMML
101: SIYFDNHSSD FEKFSQKVLV SYISLV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)