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AT1G75160.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.992
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF620)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF620); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT5G66740.1); Has 216 Blast hits to 215 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEYAeggNOG:ENOG410YAUXEMBL:CP002684EnsemblPlants:AT1G75160
EnsemblPlants:AT1G75160.1entrez:843853GeneID:843853Gramene:AT1G75160.1
hmmpanther:PTHR31300hmmpanther:PTHR31300:SF4InParanoid:F4HXG1InterPro:IPR006873
KEGG:ath:AT1G75160OMA:HLQSKSDPaxDb:F4HXG1Pfam:PF04788
PRIDE:F4HXG1Proteomes:UP000006548RefSeq:NP_177652.2TAIR:AT1G75160
UniGene:At.34808UniProt:F4HXG1
Coordinates (TAIR10) chr1:+:28209534..28211624
Molecular Weight (calculated) 43600.20 Da
IEP (calculated) 6.84
GRAVY (calculated) -0.20
Length 395 amino acids
Sequence (TAIR10)
(BLAST)
001: MKMRKLCPNL DREDGLETVL EVPVPEEMFT KMGSNAQGRW RNMHALMKAH AVVTAVATDV RTPASSSSMS NVNMHLQSKS DNEFVALLKI VGSPLIPFHV
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPTALNAV KSMYAVGQVR MQGSEMVAGE DEGTGTPVRL GKGSFEVGGF VLWQKNPNLW FLELVVSGFK
201: ISAGSDGKVA WNQSSTQPSQ AHRGPPRPLR RFFQGLDPRC TASLFLDAVC IGEQPVNGED CFVLKVETPS DILKAQCSPN TEVIHHTVWG YFSQRTGLLV
301: KFGDTKLVRV KSGRGKNDGV FWETSMESII DDYIFVDAVN IAHGGQTVTT LYRYGGAVNH RRRIEEKWRI EEVDFNICGL CLESFLPPSD INNDH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)