AT1G75150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 38228 Blast hits to 24529 proteins in 1168 species: Archae - 169; Bacteria - 4103; Metazoa - 14594; Fungi - 5866; Plants - 1861; Viruses - 317; Other Eukaryotes - 11318 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28204709..28208512 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 88779.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.33 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.19 | ||||||||||||||||||||||||
| Length | 784 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MMNDDQLSPI GESSVPVPNR MLRRLKKAKL ISDSCPGSET FDSENPDGED LGKSELQSAK GCDGIEEEDG VPSDLDGLGV EDGVTARKVL DFDYVPEFNQ 101: TIEDLGEKSG SEISDSETRD EIRVSETTES EKEDPDFETT VHEFDSPMEE LGEKGEDEEE IRVPETKEAG KKRPIVETRD GEGKERKRDK KRKKKSDDFD 201: ELPVSTASMN MTKKERREYL DQLRAENQRL LRETRDAAFE AAPLVRKPIS SVLEKIRRRK EEISKQFLSR KKSKSIDICD RDDFEDVVAE EMNEDMNLTS 301: KQNSAGQHCS EDSAGPSENS DSPSKREAES NPTHQDPSVC PQTINSGDEL LEKMSSRSLE EVMTPSVVAM NLKLNLSPVP DKSSEEAEYI KGNSDPEIHD 401: SPGDPVRKFI DEDAEEEDDS DNDLLRFEDE DDDEDEDDDD LRDMIVSQFK EDPTDKDRRN ELHQKWLEQQ DAAGTEKLLQ KLKRGVQHDE TLLSEDEDDD 501: VDDDDEERPE GADGEEVQKP EANEDEDEDE DEEDPSHANS MRMTIKKIKE MIPLMFTDED DVYVSSDDEE MEKKLLQQRL YKKMELKAKS SSSTADENSE 601: EILRHIKKPE IKKKAKPSSF KERALMEINK NPAASKSSFL GRLTKSSISE GSRKRGSNVV RGYIFERDDS NSKSSNSVAE EPSVPETIIQ EKSRPKRAPA 701: KFTASQSQER STTLQATVVE KETSTRQRST LYEILKMSSK KTSFNSRETM ISSNHTESIF AAFKLDKKPV KTNPQLQCNG TCGE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)