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AT1G75100.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : J-domain protein required for chloroplast accumulation response 1
Curator
Summary (TAIR10)
Contains a J-domain at the C-terminus which is similar to the J-domain of auxilin, a clathrin-uncoating factor in cow, yeast and worm. Arabidopsis contains 6 other proteins similar to auxilin. Expressed in leaves and stems, but not in roots. Localized in the cytoplasm. Required for the chloroplast accumulation response, but not for the avoidance response. No molecular function known.
Computational
Description (TAIR10)
J-domain protein required for chloroplast accumulation response 1 (JAC1); FUNCTIONS IN: heat shock protein binding; INVOLVED IN: chloroplast accumulation movement; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT4G12770.2); Has 3388 Blast hits to 2243 proteins in 304 species: Archae - 0; Bacteria - 260; Metazoa - 1198; Fungi - 423; Plants - 300; Viruses - 11; Other Eukaryotes - 1196 (source: NCBI BLink).
Protein Annotations
BioGrid:29066eggNOG:ENOG410YGT5eggNOG:KOG0431EMBL:AB158477EMBL:AC013258EMBL:AY057504EMBL:AY103303
EMBL:CP002684EnsemblPlants:AT1G75100EnsemblPlants:AT1G75100.1entrez:843847EvolutionaryTrace:Q9C9Q4Gene3D:1.10.287.110GeneID:843847
Genevisible:Q9C9Q4GO:GO:0005737GO:GO:0007015GO:GO:0009903GO:GO:0009904GO:GO:0071483Gramene:AT1G75100.1
hmmpanther:PTHR23172hmmpanther:PTHR23172:SF36HOGENOM:HOG000092995InParanoid:Q9C9Q4IntAct:Q9C9Q4InterPro:IPR001623iPTMnet:Q9C9Q4
KEGG:ath:AT1G75100ncoils:CoilOMA:MAQETERPaxDb:Q9C9Q4PDB:3AG7PDBsum:3AG7Pfam:Q9C9Q4
PhylomeDB:Q9C9Q4PIR:A96781PRIDE:Q9C9Q4PRO:PR:Q9C9Q4ProteinModelPortal:Q9C9Q4Proteomes:UP000006548RefSeq:NP_565101.1
SMR:Q9C9Q4STRING:3702.AT1G75100.1SUPFAM:SSF46565TAIR:AT1G75100tair10-symbols:JAC1UniGene:At.20494UniProt:Q9C9Q4
Coordinates (TAIR10) chr1:-:28191108..28193769
Molecular Weight (calculated) 71605.10 Da
IEP (calculated) 7.43
GRAVY (calculated) -0.85
Length 651 amino acids
Sequence (TAIR10)
(BLAST)
001: MQTLPSSETV LLGSNSAPPV LRSPGGDDVD IDFGDVFGGP PKRRSKVTSN EVTRHSFSES ALRRRDVIVD VGDLLPQDEK PVFGEDTSSV RRRFTTDDFF
101: DDIFRVNESS SLPGSRILSP AHKPESSSGT SSPSQFSLPA KATEIPTFNL AATRSLNKNK ETVSSSPLSR TSSKADVVST AKSYSDDCDD PPQVFVTGKG
201: RQFHFSIYKW PNKGVPVVIW GSSRLSSMSK AEETTPVPLS DYRKTSVVEK LGKNEEGDGK SGLSGLKDVK KTSLKRPGVQ TKEEKTETDL KSEQAFFGVS
301: KAREANVKPL DSVESEQAFS GVSKAHEATT VKPLHSIFHE EDERQDEKIV SEREVRKGKS KAKNTRSFTE DSRTKKKSQG TKSSLDSSPI PDKSSFASSS
401: AAPEVGKDGV KGKVSDFVKI FSKGASVGAG GESLGQSSRW RAKETPKTDI IHDGSNAKET VNIPDQQKKS TPDIPAMNRD QKPSQSTQKK DSDRESMNYK
501: APGDTVQEER QEPSTTHTTS EDIDEPFHVN FDVEDITQDE NKMEEANKDA EEIKNIDAKI RKWSSGKSGN IRSLLSTLQY ILWSGSGWKP VPLMDMIEGN
601: AVRKSYQRAL LILHPDKLQQ KGASANQKYM AEKVFELLQE AWDHFNTLGP V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)