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AT1G74940.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.989
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein of unknown function (DUF581)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G19200.1); Has 483 Blast hits to 483 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 483; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IY7IeggNOG:ENOG410Y1Y5EMBL:BT000460EMBL:BT002550EMBL:CP002684EnsemblPlants:AT1G74940EnsemblPlants:AT1G74940.1
entrez:843833GeneID:843833Gramene:AT1G74940.1hmmpanther:PTHR33059hmmpanther:PTHR33059:SF6HOGENOM:HOG000238825IntAct:Q8GRN0
InterPro:IPR007650KEGG:ath:AT1G74940OMA:QIMNDERPfam:PF04570PhylomeDB:Q8GRN0Proteomes:UP000006548RefSeq:NP_565095.1
STRING:3702.AT1G74940.1TAIR:AT1G74940UniGene:At.27584UniProt:Q8GRN0
Coordinates (TAIR10) chr1:+:28146284..28147065
Molecular Weight (calculated) 24970.80 Da
IEP (calculated) 8.04
GRAVY (calculated) -0.54
Length 222 amino acids
Sequence (TAIR10)
(BLAST)
001: MILSKRPHLM IRKLSEMLVP RSRSAAIKPE EYTASPRSPL DLNFPSPVHS KRFGSGGVGL GIVAALEETS NGINRHDPVR YSGRFRCPEI DLSDEEYTYV
101: TSPNGPTKVY YNDDGFELSE NDYRRVHKPM VTVDEPPVIE RQSVRGPTEF LSSCCLCKKK LQGKDIYMYK GEMGFCSAEC RSVQIMNDER QEQCKTQVSR
201: NADVLSSPYA AGQRLSAGVF VF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)