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AT1G74920.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:22215637 (2012): plasma membrane
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : aldehyde dehydrogenase 10A8
Curator
Summary (TAIR10)
Arabidopsis thaliana similar to betaine aldehyde dehydrogenase
Computational
Description (TAIR10)
aldehyde dehydrogenase 10A8 (ALDH10A8); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction, glycine betaine biosynthetic process from choline, metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 10A9 (TAIR:AT3G48170.1); Has 62964 Blast hits to 62643 proteins in 3067 species: Archae - 487; Bacteria - 36441; Metazoa - 2628; Fungi - 2124; Plants - 2053; Viruses - 0; Other Eukaryotes - 19231 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G74920-MONOMERBioCyc:ARA:GQT-15-MONOMERBRENDA:1.2.1.8EC:1.2.1.8eggNOG:COG1012eggNOG:KOG2450EMBL:AC008263
EMBL:AC013258EMBL:AK220905EMBL:AY087395EMBL:AY093071EMBL:BT008872EMBL:CP002684EnsemblPlants:AT1G74920
EnsemblPlants:AT1G74920.1entrez:843831ExpressionAtlas:Q9S795Gene3D:3.40.309.10Gene3D:3.40.605.10GeneID:843831Genevisible:Q9S795
GO:GO:0004029GO:GO:0005618GO:GO:0005829GO:GO:0008802GO:GO:0009414GO:GO:0009507GO:GO:0009516
GO:GO:0009651GO:GO:0019285gramene_pathway:1.2.1.8gramene_pathway:PWY1F-353hmmpanther:PTHR11699hmmpanther:PTHR11699:SF187HOGENOM:HOG000271505
InParanoid:Q9S795InterPro:IPR015590InterPro:IPR016160InterPro:IPR016161InterPro:IPR016162InterPro:IPR016163InterPro:IPR029510
iPTMnet:Q9S795OMA:WAKAPGAPaxDb:Q9S795Pfam:PF00171Pfam:Q9S795PhylomeDB:Q9S795PIR:H96778
PRIDE:Q9S795PRO:PR:Q9S795PROSITE:PS00070PROSITE:PS00687ProteinModelPortal:Q9S795Proteomes:UP000006548Reactome:R-ATH-71262
RefSeq:NP_565094.1scanprosite:PS00070scanprosite:PS00687SMR:Q9S795STRING:3702.AT1G74920.1SUPFAM:SSF53720TAIR:AT1G74920
tair10-symbols:ALDH10A8UniGene:At.26779UniPathway:UPA00529UniProt:Q9S795
Coordinates (TAIR10) chr1:-:28139175..28142573
Molecular Weight (calculated) 54434.40 Da
IEP (calculated) 4.93
GRAVY (calculated) -0.02
Length 501 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIPMPTRQL FIDGEWREPI LKKRIPIVNP ATEEVIGDIP AATTEDVDVA VNAARRALSR NKGKDWAKAP GAVRAKYLRA IAAKVNERKT DLAKLEALDC
101: GKPLDEAVWD MDDVAGCFEF YADLAEGLDA KQKAPVSLPM ESFKSYVLKQ PLGVVGLITP WNYPLLMAVW KVAPSLAAGC TAILKPSELA SVTCLELADI
201: CREVGLPPGV LNVLTGFGSE AGAPLASHPG VDKIAFTGSF ATGSKVMTAA AQLVKPVSME LGGKSPLIVF DDVDLDKAAE WALFGCFWTN GQICSATSRL
301: LVHESIASEF IEKLVKWSKN IKISDPMEEG CRLGPVVSKG QYEKILKFIS TAKSEGATIL HGGSRPEHLE KGFFIEPTII TDVTTSMQIW REEVFGPVLC
401: VKTFASEDEA IELANDSHYG LGAAVISNDT ERCDRISEAF EAGIVWINCS QPCFTQAPWG GVKRSGFGRE LGEWGLDNYL SVKQVTLYTS NDPWGWYKSP
501: N
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)